Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0006 |
Symbol | |
ID | 4602263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4686 |
End bp | 5186 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639779315 |
Product | hypothetical protein |
Protein accession | YP_925888 |
Protein GI | 119773148 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000616557 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAATT TTACAGCGGG TTTGAATAAT TTTTGGGTTG GGCTGGTTAC CGGCTTGCTG ATGCCTTTGA TTGTCGTGGC GACGCTTTTA TACCTGACCG TGGATAAGTT GACCGGGGTG GTGCAGGACT CGGCCATTTC GCCCTTTCTT GAGCGCAGCG AGCAGACTCT GGATAAGGTC GACAGTTTGC TGGTGACTCT GGATAGTAAA GTCGACAGTG CCGATCTCAA AGATCTTGAG CTGCTTACAC CACTGAAGAA CGCCAATATT TTGCCTGATC TACAGGACAT TGCCAGCGCT GCGGCTGAGC TTAAAACCAA GGTGAACGAT ATAGACAGAG AAACAGTGAT CACCGCCCTT CGCCATAAGC TGACAACCTC ACTGGCAGGC AAATTCCCCG AGGAAAAGGC GCAGGAGCTG GCTATCCATT TGGAAAGTAT TGCCCGGTTA CTGGCACAGC AAAGCGATGA GTTTGAGCAA AACACTCCGG TAACCCAATA G
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Protein sequence | MKNFTAGLNN FWVGLVTGLL MPLIVVATLL YLTVDKLTGV VQDSAISPFL ERSEQTLDKV DSLLVTLDSK VDSADLKDLE LLTPLKNANI LPDLQDIASA AAELKTKVND IDRETVITAL RHKLTTSLAG KFPEEKAQEL AIHLESIARL LAQQSDEFEQ NTPVTQ
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