| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0004 |
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| Symbol | |
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| ID | 4602261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2377 |
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| End bp | 3510 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779313 |
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| Product | alcohol dehydrogenase, zinc-binding |
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| Protein accession | YP_925886 |
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| Protein GI | 119773146 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000696036 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGCAT CCTTTATTAA ATCCCGCGCC GCCATTGCCT GGGGCCCGGG CCAGCCCTTA
TCTGTTGAAG AAGTGGATGT GATGCTGCCC AAGGCAGGCG AAGTGCTGGT GCGTATTGTC
GCCACCGGCG TGTGTCACAC CGATGCCTTT ACCCTGTCGG GCGACGATCC CGAAGGCGTA
TTCCCGGCCA TTTTGGGTCA CGAAGGCGGC GGCATTGTCG AAATGGTGGG CGAAGGCGTG
ACCAGCGTGG CGGTGGGCGA CCATGTGATC CCGCTGTACA CCGCCGAGTG CGGCAAATGT
AAGTTCTGCA CCTCGGGCAA GACCAACCTG TGCTCAGCAG TGCGCGCCAC CCAGGGCAAG
GGCCTGATGC CAGACGGCAC CACCCGCTTC TATAAGGATG GCGAGCCAAT TTATCACTAC
ATGGGCTGCT CCACCTTCAG CGAATACACA GTGCTGCCGG AAATATCCCT CGCCAAGGTC
AACCCCGAAG CGCCACTGGA GGAAGTGTGT CTGCTGGGCT GTGGCGTGAC CACAGGTATG
GGCGCAGTGC TGAAAACCGC CAAGGTGAAA AAGGGCGATA CTGTGGCCAT TTTCGGGCTG
GGTGGCATTG GTTTATCGGC GGTGATTGGC GCCACCATGG CAGGTGCCAG CCGCATCATA
GGTATCGATA TCAACGACAG TAAGTTTGAA CTGGCCAAAA AACTCGGCGC CACCGACTGC
ATCAACCCCA AAGACTACGA CAAGCCGATT CAGGACGTGA TTGTTGAGAT GACCGACGGC
GGCGTGGACT TCTCGTTTGA GTGCATCGGC AATGTGAATG TGATGCGCAG CGCGCTCGAG
TGCTGCCACA AGGGCTGGGG CGAATCAGTG ATCATCGGCG TGGCCGGTGC CGGTCAGGAG
ATTTCCACCC GTCCATTCCA GCTGGTAACC GGCCGGGTAT GGCGCGGCAG TGCCTTTGGC
GGCGTAAAAG GACGCTCAGA ATTGCCTGGT ATTGTTGAGC AGTATCTGCG CGGTGAATTT
GCCCTGAGTG ACTTTATCAC CCACACCATG GGACTGGATG CGATTAACGA AGCGTTCGAT
CTGATGCACG AAGGCAAAAG TATCCGCAGC GTGATCCATT ACGATCGTAA ATAA
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| Protein sequence | MSASFIKSRA AIAWGPGQPL SVEEVDVMLP KAGEVLVRIV ATGVCHTDAF TLSGDDPEGV
FPAILGHEGG GIVEMVGEGV TSVAVGDHVI PLYTAECGKC KFCTSGKTNL CSAVRATQGK
GLMPDGTTRF YKDGEPIYHY MGCSTFSEYT VLPEISLAKV NPEAPLEEVC LLGCGVTTGM
GAVLKTAKVK KGDTVAIFGL GGIGLSAVIG ATMAGASRII GIDINDSKFE LAKKLGATDC
INPKDYDKPI QDVIVEMTDG GVDFSFECIG NVNVMRSALE CCHKGWGESV IIGVAGAGQE
ISTRPFQLVT GRVWRGSAFG GVKGRSELPG IVEQYLRGEF ALSDFITHTM GLDAINEAFD
LMHEGKSIRS VIHYDRK
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