Gene Sala_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3205 
Symbol 
ID4074343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008036 
Strand
Start bp14771 
End bp15706 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content63% 
IMG OID638004406 
Productnitrogen-fixing NifU-like 
Protein accessionYP_611137 
Protein GI98152888 
COG category[O] Posttranslational modification, protein turnover, chaperones
[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0694] Thioredoxin-like proteins and domains
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGGGG CCTGGTGGGC GGCTTGCTTC AGCCTTACCT CTACCGGAAC ATCAAGTACG 
CCTGATCCGA TGTCAGAGGC GGATCCCCAG CGGCCCGAGC CAACGCTTTC CCGCCTGCTG
GGGGATCTGA CCGCGCTGGA AGCGCTGGCA GAGAACTGGG AAGAAGGTGC ACGTAATGGT
GCGCAGGCAC GGGCAGCGGC GCTTGATGCG CTCAATGCCG AAGCCTTCCG TCGCCTGATC
CGTTCGCTGC GTGAGCTGCC CGGCGCAGCC GAGGCCTTGC GTCAGGCGGC GGCGGACGAG
GTGGTCTATT GCGTGCTCCG CCGCCATGGC ATCCTCAAAG CCAGCCTGTT CGAGCGGGTC
GATGCCGCGC TTGCCACGGT GCGCCCGACG CTGGCCGGCC ATGGCGGCGA TGCCGAACTG
GTCGAAGTAT CTGGCGACAA GGCAGTGGTG CGTTTTCTGG GGGCCTGTGA TGGATGTCCC
GCTTCGGCGC TGACTTTCTA TGCCGGGGTA AAGAAAGCAA TCACAGAGCA AGTGCCCGAA
ATCCGCGAAG TCAAGCAGGC CAAGGGGCTG GGCGGCGGCG GTGGTGATAC GGTGCATTTC
ACTTCTCCCT TCGCCGCGCA TGAGCATGAA GGCTGGCTCC ATGCTCTGCA ACTAACTGAA
TTGCCCGACG GGACGACTTC TGTCCTGGAG CTGGAAGGGC GTTCGCTGCT GCTTTCGCGA
TTCGGGGACA AGGTTACCTG TTTCGAGAAC GCCTGTGCGC ATCTTGGCAT GCCGATGGAC
CAGGCGGAAA TTGCCGATGG CTTCATCACC TGCCCGCATC ATGGTTTCCG TTATGCGCTC
GAAAGCGGTG AATGCCTGAC GGCACCAGAA GTGCAATTGC AACCCCATGC CGTACGCGTC
CGAGGGGATG CCATCGAACT GAGGCTGACG CGATGA
 
Protein sequence
MPGAWWAACF SLTSTGTSST PDPMSEADPQ RPEPTLSRLL GDLTALEALA ENWEEGARNG 
AQARAAALDA LNAEAFRRLI RSLRELPGAA EALRQAAADE VVYCVLRRHG ILKASLFERV
DAALATVRPT LAGHGGDAEL VEVSGDKAVV RFLGACDGCP ASALTFYAGV KKAITEQVPE
IREVKQAKGL GGGGGDTVHF TSPFAAHEHE GWLHALQLTE LPDGTTSVLE LEGRSLLLSR
FGDKVTCFEN ACAHLGMPMD QAEIADGFIT CPHHGFRYAL ESGECLTAPE VQLQPHAVRV
RGDAIELRLT R