Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3175 |
Symbol | |
ID | 4082511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3331863 |
End bp | 3333008 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638011560 |
Product | threonine aldolase family protein |
Protein accession | YP_618211 |
Protein GI | 103488650 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.534304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCG ACCGCCTCCT GCACGACGCG CTGATCGGTC GGCAGGGGAG CCGCGCCGAC CTCAACACCC CGGTGCTGAT TCTCGACCGC GAGGCGCTCG ACCGCAACAT CGCCCGCATG GCGGCGCTCA CCAAGGCGGC GGGCGTCGCG CTGCGCCCCC ATGCCAAAAC GCATAAAAGC GTCGATATCG CGCGCCGCCA GCTCGATGCC GGGGCGGTCG GCGTCTGCTG CGCAAAGATC GGCGAGGCCG AAATACTGGC GGATGGCGGC ATCACCGGCA TCCTGATCAC CTCGCCCGTC GCCGCCCCCG CCGCGATCGC GCGTCTTGCG AAACTGGCGG CGCGCGCCGA GGGGCTGATG GCGGTCGTCG ATCATCCCGC GGTCGCCGTG CGCGTAGACG CGGCGCTTGC GGTCGAGGGT GCGCGGCTCG ACGTCATCAT CGACATTGAC CCCGGCATCG CACGCACTGG CGTCGCGTCG GCCGAAGCGG CGGTCGCGCT CGCGCAGACG ATCGACGCCT TGCCCGGCCT CGCCTGGCGC GGCGTGCAAT ATTATTGCGG GTCACAGCAG CATATCGAAA GCTATGCCGA ACGCCGCGCC GCGATCATCG AGCGCACGGA CTATTTGCAG GGGGTCATCG CCGCGCTGGC GGACGCCGGT TTCGCGCCAC CGATCGTCAC CGGGTCGGGC ACCGGCACGC ACCGCATCGA CCTCGACCTC GGTGTCTTTA CCGAGCTTCA GGCGGGCAGC TATGTCTTCA TGGACAAGCA ATATCTCGAC TGCGAGCTGG CGGAGGGCGA AGCCGCGCCG TTCGAGGTCG CGCTCGCGGT CGATGCGCGC GTCGTCAGCG CCAACCACAG CGGCCTCGTC ACGATCGACG CGGGTTTCAA GTCGCTCTCG ACCGACGGCG GGGTGGCGGC GGTCCGGCGC GGCGCGCCCG AAACCGCCTT TTTCGCCTTC ATGGGCGACG AACATGCCGC GCTCATCGCC CCCGGCATCG GCGACATGCT GCATCCCGGC GATCCCGTCA GCCTGACCGT GCCGCACTGC GACCCGACGG TGAACCTCTA TGACCATTAT CATGTCGTCG ACGGCGACAC GCTGATCGAC ATCTGGCCGG TCAGCGCCCG CGGCTGTGCG CGATGA
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Protein sequence | MTSDRLLHDA LIGRQGSRAD LNTPVLILDR EALDRNIARM AALTKAAGVA LRPHAKTHKS VDIARRQLDA GAVGVCCAKI GEAEILADGG ITGILITSPV AAPAAIARLA KLAARAEGLM AVVDHPAVAV RVDAALAVEG ARLDVIIDID PGIARTGVAS AEAAVALAQT IDALPGLAWR GVQYYCGSQQ HIESYAERRA AIIERTDYLQ GVIAALADAG FAPPIVTGSG TGTHRIDLDL GVFTELQAGS YVFMDKQYLD CELAEGEAAP FEVALAVDAR VVSANHSGLV TIDAGFKSLS TDGGVAAVRR GAPETAFFAF MGDEHAALIA PGIGDMLHPG DPVSLTVPHC DPTVNLYDHY HVVDGDTLID IWPVSARGCA R
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