Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3148 |
Symbol | hisH |
ID | 4082484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3299163 |
End bp | 3299771 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638011533 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_618184 |
Protein GI | 103488623 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGA TTGCCCTGAT CGACTATGGC GCGGGCAATC TTCGCTCGGT GCATAATGCG CTCGTCGCGG CGGGCGCGGA CACTGTCGCC GTCACCGCCG ACCCCGATGC CGTGGCCCGG GCCGACCGCA TCGTGCTGCC CGGCGTCGGC GCGTTCGCGG CGTGCATGAA CGGGCTGTCG GCGATCGACG GGCTGATCGA AGCGATGGTG CGCCGGGTGC GCGGCGAAGG TGCGCCCTTC CTCGGCATCT GCGTCGGGAT GCAATTGCTC GCCGATTCGG GCGAAGAGCA TGGTCGGCAT CCCGGCCTCG GCTGGATCGG CGGCACGGTG CGCGCGTTCG ACCCGCAACC GGGCCTCTGC ATCCCGCACA TGGGCTGGAA CGATGTCGTC CCGACGTTCG CGCACCCGGT GATCGCGGTG GGCGAAGCCT ATTATCTCCA CGGCTATCAT TTCGCGGACG CGGCGCATGT CGCCGCGACG AGCAGTCACG GCGGTCCCTT CACCGCCGCC GTGGCGAAGG ACAATGTCGT GGGTGTCCAG TTTCATCCCG AAAAAAGCCA GGCCTATGGC CTCGCGACGC TCGAAAGGTT CCTCGCTTGG CGGCCCTGA
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Protein sequence | MSVIALIDYG AGNLRSVHNA LVAAGADTVA VTADPDAVAR ADRIVLPGVG AFAACMNGLS AIDGLIEAMV RRVRGEGAPF LGICVGMQLL ADSGEEHGRH PGLGWIGGTV RAFDPQPGLC IPHMGWNDVV PTFAHPVIAV GEAYYLHGYH FADAAHVAAT SSHGGPFTAA VAKDNVVGVQ FHPEKSQAYG LATLERFLAW RP
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