Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3102 |
Symbol | |
ID | 4082838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3249956 |
End bp | 3251356 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011488 |
Product | hypothetical protein |
Protein accession | YP_618139 |
Protein GI | 103488578 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0806544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCC TTTCGCCTAT AGGGAGGCAT GACCGAAGCC GACAGGGGCC GGGCGCCGCC GCGCCGCATC ACCGCCCGAT GACCCCTTTT CCCTGGTCCG ACGTCGCGAT CATCGCGATT CTCGTCCTTC TCAACGGCCT GTTCGCGATG TCCGAACTGG CGATCGTCTC GGCGCGGCAG CCGCGGTTGC AGGCAGCCGA AAAGCGCGGC AGCCGCGGCG CGAAGATCGC GCGCCAGCTC GCGTCCGACC CCGGCCGCTT CCTGTCGACG GTGCAGGTCG GCATCACGCT GATCGGGATT CTCGCCGGCG CCTATTCGGG CGCCAGCCTG GGCGCGCCGG TCGCGGAGCG TTTGCAGGCC TGGATAGGAC TCGACGACGA AACGGCGCTG ACCGCGGGCT TTGCCGTAGT CATCGCACTC ACGACCTATG CCTCGCTGAT TGCTGGCGAG CTCGTGCCCA AGCAGTTTGC TTTGCGTGCG CCCGAACCGA TCGCCATTTT CATCGCCTTG CCGATGCTGT GGCTGTCGAA AATCGGTGCG CCGCTGGTGT GGCTGCTCGA CCGCAGCTCG GCGCTGGTAT TTCGCCTGCT CGGGCTGAGA CGTGAATCGG AGGAGCGAGT GACCGCCGAG GAGCTGCACC TGATCGTCGC CGAAGCGTCG AAATCGGGGG TGATCGAGGA AAGCGAGCGG GCGATCATTT CGGGCGTCGT GCGCCTCGCC GACCGGCCGG TGCGCGAGGT GATGACGCCG CGCAAGGATG TCGACTGGAT CGACATTTCG CTCGATGCGC GCGGCCTGCG CGACAGGCTG CTCGAAACGC CGCACAGCCG CCTGCCGGTC GCGCGCGGGT CGGTCGACGA GATCGTCGGC GTGGTACAGG CGCGCGACAT CGCCGCGGCG CTGTTCGCCG GGCAGACGCT GGACCTGGAA AAGCTGATGC GCCCCGCGAA GGTCATCCAC GACCAGCTCG ACGCGATGGA CGCGCTCGAA GCCTTGCGCG CGGCCGAGGT GCCGATGCTG CTGGTCCACG ACGAATATGG CCACTTCGAC GGGCTGGTGA CGCCCGCCGA TCTGCTTTCG GCGATTGCGG GCGAATTTGC GTCGGACCAG GACATCGGCA GCGATCCCTA TGTGGTCGAG CGCGACGACG GCAGCCTGCT GATCGCGGGA GCGATGCCCG CCGACCAGAT GGCCGAGCGG CTGGGGATCG AATTGCCCGG TGACCGCGAC TATGCCACCG CCGCGGGCCA CGCGCTCGCG GTGCTCAAGC ATTTGCCTGT GGAAGGCGAA AGCTTCACCG ACCGGGGCTG GAAGTTCGAG ATCGTCGACA TGGACGGACG CAAGATCGAC AAGCTGCTCG TCAGCGACGT CCGCAAGCCG AAGGGCGCCG AGGCCGAATA G
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Protein sequence | MLRLSPIGRH DRSRQGPGAA APHHRPMTPF PWSDVAIIAI LVLLNGLFAM SELAIVSARQ PRLQAAEKRG SRGAKIARQL ASDPGRFLST VQVGITLIGI LAGAYSGASL GAPVAERLQA WIGLDDETAL TAGFAVVIAL TTYASLIAGE LVPKQFALRA PEPIAIFIAL PMLWLSKIGA PLVWLLDRSS ALVFRLLGLR RESEERVTAE ELHLIVAEAS KSGVIEESER AIISGVVRLA DRPVREVMTP RKDVDWIDIS LDARGLRDRL LETPHSRLPV ARGSVDEIVG VVQARDIAAA LFAGQTLDLE KLMRPAKVIH DQLDAMDALE ALRAAEVPML LVHDEYGHFD GLVTPADLLS AIAGEFASDQ DIGSDPYVVE RDDGSLLIAG AMPADQMAER LGIELPGDRD YATAAGHALA VLKHLPVEGE SFTDRGWKFE IVDMDGRKID KLLVSDVRKP KGAEAE
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