| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3076 |
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| Symbol | |
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| ID | 4083084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3227190 |
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| End bp | 3228047 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011462 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_618113 |
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| Protein GI | 103488552 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCG CAGGCAAAGT CGCCGTCGTC ACCGGCGCGG CATCGGGCAT CGGCAAGGCG
ACTGTGCTCA AACTCGCGGG CGAAGGCGCG CATGTCTTTG CCGCCGACAT CGACGAAGCG
GGCGGCCGCG CGCTCGCCGA CGCGTCGAAC GGCAGGATCG ACTTCGTGCG CTGCGACGTC
ACGGTTCCGT CCGATATCGA GGCGCTGATG GATGCCGCCG CGGCGAAGGC GGGCGGTATC
GATATCGTCT TCAACAATGC CGCCGCGGGC GGCGACCGCG CGCCAATCGA CGAGATTACG
CCCGAGGGCT GGGATGCGAC GATGGACCTG GTGCTGAAAT CGGTCGCGAT GGGTATCCGT
TATGCTGCGC CGCACATGAA GGGCCGCAAG GGCGCGAGCA TCGTCAACAC CGCGAGCGTT
GCGGCGCTGG GCGCCGGCTA TTCGCCCACC GCCTATGCGG TGGCCAAGGC GGGCGTGCTG
CATCTGACCA GGGTCGCCGC GACCGATCTG GCGCAATATG GCATCCGGGT GAACGCAATC
TGCCCCGGCT TCATCAACAC CAATATCTTC GCCGCGTCGC TCGACGTGCC CGACGCGATG
AAGGCAGAGG CGAACGCGAT CATCGCCGGG ATGAGCGCGC AGGCGCAACC CGTCGCGCGC
GGCGGCCAGC CCGAGGACAT TGCCAACGCC GTGGCGTATC TTGCGAGCGA CGAGTCGAGC
TTCATGACCG GCACGCATCT GCTCGTCGAC GGCGGGCTGA CGATCGGCCA GCGCCACGCC
TGGGACCCCG AAACACCGGG GATGTTCGAC GCGCTGGCGC AGATGGAGGA GGCTGCCAAG
GCCGGAGCGC CAGCGTGA
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| Protein sequence | MRFAGKVAVV TGAASGIGKA TVLKLAGEGA HVFAADIDEA GGRALADASN GRIDFVRCDV
TVPSDIEALM DAAAAKAGGI DIVFNNAAAG GDRAPIDEIT PEGWDATMDL VLKSVAMGIR
YAAPHMKGRK GASIVNTASV AALGAGYSPT AYAVAKAGVL HLTRVAATDL AQYGIRVNAI
CPGFINTNIF AASLDVPDAM KAEANAIIAG MSAQAQPVAR GGQPEDIANA VAYLASDESS
FMTGTHLLVD GGLTIGQRHA WDPETPGMFD ALAQMEEAAK AGAPA
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