Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3059 |
Symbol | |
ID | 4082908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3209390 |
End bp | 3210592 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638011445 |
Product | cystathionine beta-lyase |
Protein accession | YP_618096 |
Protein GI | 103488535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG ACGACGACAG CCTCCGCCCC GCGACGCGGC TCGTTCAGGG CGGGCGGCGG CCCGAATGGA CCGGCGATCC GCGGCTGGGC GGCGGGATCG TCAATCCGCC CGTCTGGCGC GCGTCGACGA TCCTGTACGA CACTGTCGCC GACCTGAAGG CGCGCGGTCA TGCGACGCAC GACAAGCTTT ATTACGGCCG CCGCGGGACG CCGACGGTGT GGGCACTCGC CGACGCCCTG ACGGCGATGG AGCCGGGCGC CGCAGGAACC TTGCTCTATC CCTCCGGGGT CGCCGCCAAT TCGGCGGGGC TGCTCGCGCT GCTGTCGCCG GGCGATCACC TGCTGATGGT CGACAGCGCC TATGAGCCGA CGCGCGCCTT CTGCGACGGG ATGCTCGCGC GGCTGGGCGT GACGACGACC TATTATGATC CGCTCGTCGG TGCCGCGATC GCCGAACTGA TCCGCCCCGA AACGCGGCTG ATCTTCCTCG AATCGCCGGG CAGCCTGACC TTCGAGGTGC AGGATGTGCC CGCGATCACC GGCGTCGCGC GGGCACGCGG CGTGCTGACG ATGATCGACA ATACGTGGGC GACGCCCTTG CTGTTTCCCG CGCTGGCGCA CGGGGTCGAT GTCGCGATGA TGAGCCTCAC CAAATATGTC GGCGGGCACA GCGACGCGAT GATGGGCTCG CTCACCGCGA CGCGCGCCGT GTGGCCGAAG CTGCGCAGCG CCGCCTATCA ACTCGGCCAG GCGGTGTCGC CCGACGATTG CGCGCTCATG CTGCGCGGAC TGCGCACGCT CGACGTACGG ATGCAGCGCC ATGGCGAAAA TGGGCTTGTG GTCGCAAACT GGCTTGCCGC GCGCGGCGAA GTCGGCCGCG TGCTCCATCC GGCGCTGGCA GGCGATGGCG GCCATGCGAT CTGGGCGCGC GATTTTTCGG GCCCCAGCGG GCTGTTCGGC TTCACGCTGA AGGGCGCCGA CGAGGGCGCG CGCACGCGCT TTATCGACGC ACTGACGCAA TTCGGCATAG GCTTCAGCTG GGGCGGTTAT GAAAGCCTTG TCGTGCCCGC CGACCCGGCG GGCATCCGCA CCGCGACACG CTGGACCGAC CCCGACCCGC TCGTCCGCCT GTCGATCGGG CTCGAGGACC CGGCCGACCT GATCGCCGAC CTCGAGCGCG GCTTTGCCGC GATGACGGCA TGA
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Protein sequence | MTTDDDSLRP ATRLVQGGRR PEWTGDPRLG GGIVNPPVWR ASTILYDTVA DLKARGHATH DKLYYGRRGT PTVWALADAL TAMEPGAAGT LLYPSGVAAN SAGLLALLSP GDHLLMVDSA YEPTRAFCDG MLARLGVTTT YYDPLVGAAI AELIRPETRL IFLESPGSLT FEVQDVPAIT GVARARGVLT MIDNTWATPL LFPALAHGVD VAMMSLTKYV GGHSDAMMGS LTATRAVWPK LRSAAYQLGQ AVSPDDCALM LRGLRTLDVR MQRHGENGLV VANWLAARGE VGRVLHPALA GDGGHAIWAR DFSGPSGLFG FTLKGADEGA RTRFIDALTQ FGIGFSWGGY ESLVVPADPA GIRTATRWTD PDPLVRLSIG LEDPADLIAD LERGFAAMTA
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