| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3058 |
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| Symbol | |
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| ID | 4082907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3208086 |
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| End bp | 3209393 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011444 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_618095 |
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| Protein GI | 103488534 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.914338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC TCGACGCGCT GTTCGCCCGC ATGGGTTTTC CGGCGCTCGC CGAGGCGCAG
CTGGTCGAGC TGGGCGTCGC GGGGGGGCTG GCGGTGTTTG CGCTCGCCAC GAGCTGGCTG
GTCGGAAAAC GGATCGGTCC CCGGCTTGCC GACTGGCTGC ACGGGCAGGA TCTGGGTGCG
CGCGGACCGC TCACCGAACG CGCCGGCGCG ATGCTCGGCT GGATCGCCGC GCTGCTCATC
GTCGGTCTCG CCGGTGCGCT CTGGCCGTGG CATCCCTATG CGCTGCTGCT GCTGAACCTG
CTGTTCGCGC TCGGTGTTGC GGCGCTGGCG CGGCACCTAT TGATCGGCGT CGGGCTGGGC
GACGGGGCCG CGCTGGCCGG GGCATTCGTG GCGCTCGTCG TCATGATGTC GCGTGCGGTC
GGCGGGCTGG AGTTGTTGCA GGAACGGCTC GACGCCTTCG GCTTTTCGAT CGGCGACCGG
CATTTTTCGT TGCTCACCGT CGTCAACCTG CTGGTCACCG TGGTCATCCT TTTCACGCTG
GTTCGGCTGG CGACGCGCGT GCTGCGGCGC ACGATCAGGG GTAGCGAGCG TTTCGATCCG
ACGCAGCGGC TGCTCATCGA AAAGATTTCG GCGGTGCTGA TCGTCGTCGC CGCCTTCTTT
GTCGGCATCG ACATATTGGG CATCGACCTC ACCGCCTTTG CGGTGTTTTC CGGCGCGCTC
GGTCTTGCAA TCGGTTTCGG GCTGCAAAAG ACCGTCGGCA ATCTGATCGC GGGCATCATC
CTGCTGATGG ACCGCTCGAT CAAGCCCGGC GACGTCATCG CGGTCGGCGA CAGTTTCGGA
TGGGTGAACA AGATCGGCGT GCGCGCCGTG TCGGTGATCA CGCGCGAGGG CAAGGAACAT
CTGATCCCCA ACGAAATCCT GATGACGCAG GAGGTCGAGA ACTGGAGCTA TTCAAGCCGC
ACGGTGCGCG TGAGCATCGC GGTGGGGGTC GCCTATGACA CCGACCTGCG GCTGGCGCAG
CAGCTGATGA TCGAGGCCGC CAAGGAAGCG AAGCGTGTGC TCCCCGATCC TGCCCCGGTA
TGCTGGATCA CCGGTTTCGG CGACAGCAGC GTCGACCATG AGGTGCGCTT CTGGATCACC
GACCCGGAGG CGGGGATCGG CAATATCAAG GGCGATGTGT TCCTGCGCAT CTGGGACAAG
TTCCAGGCGG CGGGAATCGA AATCCCCTAT CCGCAGCGCG ATCTGCATGT GCGCGCGATG
CCCGAAACGG CGACGAAGGC AGCGAAGGCG ACGAAGGCGA AAAGCTGA
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| Protein sequence | MNELDALFAR MGFPALAEAQ LVELGVAGGL AVFALATSWL VGKRIGPRLA DWLHGQDLGA
RGPLTERAGA MLGWIAALLI VGLAGALWPW HPYALLLLNL LFALGVAALA RHLLIGVGLG
DGAALAGAFV ALVVMMSRAV GGLELLQERL DAFGFSIGDR HFSLLTVVNL LVTVVILFTL
VRLATRVLRR TIRGSERFDP TQRLLIEKIS AVLIVVAAFF VGIDILGIDL TAFAVFSGAL
GLAIGFGLQK TVGNLIAGII LLMDRSIKPG DVIAVGDSFG WVNKIGVRAV SVITREGKEH
LIPNEILMTQ EVENWSYSSR TVRVSIAVGV AYDTDLRLAQ QLMIEAAKEA KRVLPDPAPV
CWITGFGDSS VDHEVRFWIT DPEAGIGNIK GDVFLRIWDK FQAAGIEIPY PQRDLHVRAM
PETATKAAKA TKAKS
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