| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3039 |
|---|
| Symbol | |
|---|
| ID | 4083047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3186402 |
|---|
| End bp | 3186806 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638011425 |
|---|
| Product | cupin 2, barrel |
|---|
| Protein accession | YP_618076 |
|---|
| Protein GI | 103488515 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0762499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.519853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC TGCTCGCCAT ATTGCTCGCG GGCGCCGGCG CCGCCCCTGC GATGGTCGTG
ATCGACGAAG CGGCGACGGT GCGCGAGGAA GCGCCGCCGC ACGGGCAAAT CGGCATGTCG
ACCGCGTGGC GAATCAGCGA CGCCGTTCCC GCACCGCGCA GCTTCGAGTT TCGCAAGCGC
GCACTGCACG TCGGCGCGGC TATCGGCGTA CATCCCATCG ACCATGACGA GATTTATTAT
GTCGTGTCGG GGACGGGTAT CGTCCATTCG GACGGAAAGG AGCAGGCGCT CGGCACCGGC
ATGGCCGCGT GGCTCTACAA GGGCGCGAGG GTCGGCATCC GCCAGACAGG AAGCGAACCG
CTGGTCCTCA TCATCGCCTA TCCCAACCAA AGGGTCGGAC AATGA
|
|---|
| Protein sequence | MSALLAILLA GAGAAPAMVV IDEAATVREE APPHGQIGMS TAWRISDAVP APRSFEFRKR
ALHVGAAIGV HPIDHDEIYY VVSGTGIVHS DGKEQALGTG MAAWLYKGAR VGIRQTGSEP
LVLIIAYPNQ RVGQ
|
|---|
| |