Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3016 |
Symbol | |
ID | 4082848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3159693 |
End bp | 3161654 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011403 |
Product | beta-lactamase-like protein |
Protein accession | YP_618054 |
Protein GI | 103488493 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.401526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGAC TGACGACCCT GTTGATCGCA GGATGCCTGC CGCTGCCCGC GCCGGCACAG GATGCCGCGA GCGAAGCGAC GCGCACCGCA CAGGCCGAGC TTGCGGGGCG CCTGCCGCTC GACGATCCGC GCGACGAGGC GAATGCGACG CGCGGCAAGC TCGCCGAGAT TCCCGGCGGG GTGATTACCG GCAAGGACGG CGCCGTCATC TGGGACCGGC GGCCCTATGC CTTTCTGGAG GCGCGCGAGG CGCCCGATAC GGTGAACCCC TCCTTGTGGC GGCAGGCGCG GCTCAACGCC GTCCATGGGC TGTTCGAGGT GGTGCCGGGC AAGATCTGGC AGCTGCGCGG CTATGACATA TCGGTCATGA CGGTGATCCA CGGCAGGACC GGCTGGATCG TCGTCGATCC GCTTTTGTCG GAGGAAGCCG CGGCGGCGAG CTGGAAGCTG TTTGCCGACA CGATCGAAGC TAAAGAAGGC CGACGCCCGA TCAAGGCCAT AATCTTCAGT CACAGTCACA GCGACCATTT CGGCGGCGTC GGCGGCATCG TGACCCCCGA ACAGGTCGCG CGCCAAAACA TCCGCATCAT CGCGCCGCAC GGTTTTTCCG AAGAAGCGAC GTCGGAAAAT GTCCTCGCGG GCGCCGCGAT GGGGCGGCGT GCGCTTTACA TGTTCGGGGC GATCCTGCCG CCGGGGCCGC GGGGACAGGT CGATACCGGG CTGGGCCCCA AATTGTCGTC GGGGACGATC GGTTATATGG AGCCGACCGA GACGGTGGGC GCCGAGGGCG GCACACTGAC CATCGACGGG CTGGCGTTCG ACTTTCTCGA CGCGGGCGGC ACCGAGGCGC CGTCGGAGTT CGTCTTCTAC ATCCCCGCAT ACAAGACGCT GCACACGACC GAAGTGGTGA CGCACAACCT GCACAATATA TTGACGCTGC GCGGGGCGCA GGTGCGCGAC GCGCTGCGCT GGTCAAAGCT GATCGACGCG ATGCTGCTGA AATGGGGCGG GGTGGCCGAG GTCACGCTGG CGTCGCACCA CTGGCCGACG TGGGGCGCGG ACGAGGTGCG CGCCTTGCTC GCGAACCAGC GCGACGCCTA TCGCTATGTC CACGACCGCA CTTTGTTCCT CGCAAATCGC GGCGCGACGC TGCATGAGCT GGCCGACGCG ACGGTCGAAG CGCCGGTGCA GGCGTCCGAT TTTTCGACGC GCGGCTATTA TGGCACGCTC AATCACGACA TGAAGGCGGT CTATCAGCGC TATTTCGGCT GGTGGGACGG CAATCCCGCC AATTTCAACC CGCTGCCCCC CGAACAATCG GCACCCAAAT ATGTCGCGCT GGCGGGCGGC GCCGACAAGC TGCTGGCAGC AGGGCGCGCG GCGATTGCAT CGGGGGACTA TCGCTGGGCG GCGGAACTGC TGAACAAGCT CGTCTTTGCC GAACCCGGCA ATCGCGCGGC GCGCGACGCG CTCGCCTCGG CCTATGACCA GCTCGGCTAT CAGGCCGAAT CGGGGGCCTG GCGCAACTAT TATCTCGCCG CCGCGGCGAG CCTGCGCGGC AATGCCGTCG AAGCGGCGAC ACGCAACGGG CAGAGCCGAT CTTTCGTCAG CGCGATCCCC ACCGCGGTCT TTTTCGATGC GCTCGCGACG CGCTTCGATG CGGCGAAGGG CGCGGCGCTC AACGGCACGT TCCAGTTCAT ACTGCCCGAC AGCCGGGAGA GCGTCGCGGT CGTCGTCGGC GGCGGGGTCG AGTTCCCGCG CCATGGCGTG ACCGACCCCG CGCCGACCGC AACGATCACC ATCAACCGCA AGACGCTCGA CGATGTGATG CTGGGGCAGG CGCAGTTTCC CGCGCTGATG CAGTCGGGCG CCATTCGCAT CGAGGGGGAC CGCATGGCCT TCCTGTCGTG GTTCGCGCTT CACCCGCCCG CCGACCCGCG CTTCAATATA GTTGTGCCGT AA
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Protein sequence | MRRLTTLLIA GCLPLPAPAQ DAASEATRTA QAELAGRLPL DDPRDEANAT RGKLAEIPGG VITGKDGAVI WDRRPYAFLE AREAPDTVNP SLWRQARLNA VHGLFEVVPG KIWQLRGYDI SVMTVIHGRT GWIVVDPLLS EEAAAASWKL FADTIEAKEG RRPIKAIIFS HSHSDHFGGV GGIVTPEQVA RQNIRIIAPH GFSEEATSEN VLAGAAMGRR ALYMFGAILP PGPRGQVDTG LGPKLSSGTI GYMEPTETVG AEGGTLTIDG LAFDFLDAGG TEAPSEFVFY IPAYKTLHTT EVVTHNLHNI LTLRGAQVRD ALRWSKLIDA MLLKWGGVAE VTLASHHWPT WGADEVRALL ANQRDAYRYV HDRTLFLANR GATLHELADA TVEAPVQASD FSTRGYYGTL NHDMKAVYQR YFGWWDGNPA NFNPLPPEQS APKYVALAGG ADKLLAAGRA AIASGDYRWA AELLNKLVFA EPGNRAARDA LASAYDQLGY QAESGAWRNY YLAAAASLRG NAVEAATRNG QSRSFVSAIP TAVFFDALAT RFDAAKGAAL NGTFQFILPD SRESVAVVVG GGVEFPRHGV TDPAPTATIT INRKTLDDVM LGQAQFPALM QSGAIRIEGD RMAFLSWFAL HPPADPRFNI VVP
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