| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3009 |
|---|
| Symbol | |
|---|
| ID | 4082953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 3150015 |
|---|
| End bp | 3150377 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638011394 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_618047 |
|---|
| Protein GI | 103488486 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.243208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA CCATCCTGGT CGTCGAAGAT AATGAACTCA ACCTGCGCCT GTTCTGCGAC
CTCCTGAACG CCCATGGTTA CAGCGCGCAT CCGGTGCGCG ACGGCCGCGA CGCGCTGGCG
AAGGCGCGCG CGGTGTCGCC CGACCTCATC ATCATGGACA TCCAGCTGCC GCATGTGTCG
GGCCTCGACC TTATCGGCCA GATGAAGGCC GACCCGATCT TGCGCGCGAT ACCGATCATG
GCGGTCACCG CCTATGCGGG CAAGGGCGAC GAGGAGCAGA TCCGCGCCGC GGGCGCCGAA
GCCTATGTCT CGAAACCCAT CTCGGTGATC AGGTTCATCG AAAGTGTCGC CGCCTTCGCC
TGA
|
|---|
| Protein sequence | MGKTILVVED NELNLRLFCD LLNAHGYSAH PVRDGRDALA KARAVSPDLI IMDIQLPHVS
GLDLIGQMKA DPILRAIPIM AVTAYAGKGD EEQIRAAGAE AYVSKPISVI RFIESVAAFA
|
|---|
| |