| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2994 |
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| Symbol | |
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| ID | 4082938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3134588 |
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| End bp | 3136414 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638011379 |
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| Product | peptidase M24 |
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| Protein accession | YP_618032 |
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| Protein GI | 103488471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.020362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC CCGTCCACGC CGAGCGCCTC GCCCGCGTCC GTGCCGAATT GAAAGCGCGC
GGCCTCGATG GCTTCATCGT GCCGATCAGC GACGAACATA TGAGCGAATA TGTCGGCGCC
TATGCGCAGC GCATGGCCTG GCTGACCGGC TTTGGTGGAT CGGCCGGGAC CGCGGCGGTC
CTGCCCGAAA AGGCGGCGGT GTTCGTCGAC GGCCGCTACA CCGTGCAGGT GCGCGACCAG
GTCGACGGGT CGCTCTTCGA CTATGTCGGG GTGCCGCAGT CGAGCGTCGC CGAATGGCTG
GGCAGCCATG TCAGCGCGGG GCAGAGGGTT GGTTATGACC CCTGGCTGCA CGGTATAGAC
TGGGTCCGCG GGCTGGAAAA GGCGCTGGCG GCGAAAGGTG CGAGCCTTGT CGCGGTCGAC
AAGAATCCGG TCGACGCGGC ATGGGACGAC CAACCCGCGC CGAGCAACGC GCCGGTGAGC
GTTTATGATA CGGCGCTCGC CGGACAGAGT GCGGTCGAGA AACGCGGTGT CATCGCCGAC
TGGCTGAAGG CGAAGGGGCT CGACACGACG GTGATGACCG CGCTCGATTC GATCGCCTGG
ACCTTCAATA TCCGTGGGGA GGACGTGAGC CACACGCCGG TCGGGCTGGC CTTTGCACTG
CTCCACGCCG ACGCCACCGC CGATCTGTTC ATCGCGCCCG AAAAAATCAC CGACGCGGTG
CGCGCGCATC TGGGCAACAG CGTGCGGATT CACGACCGCA GCGCCTTTGA AGGCGCGCTG
GCCGGGCTTG CGGGCAAGAA AGTCGCTGTC GATCCCGACC GCGCGGTCGC GGCGATCTTT
ACCGCGCTCG AAAACGCGGG TGTGCAGGTC GAACGGCACC GCGACCCCGC GGTGCTGCCC
AAGGCGATCA AGAATCAAGT CGAACTGAGC GGCACGCGCG CTGCGCACCT TCGCGACGGC
GTCGCGGTGT CGCGTTTCCT CAAATGGATG GAGGAGGTCG CGCCGCAGGG CGGCCTCGAC
GAGCTGGGCG CGGCGGCGAA GCTGCGCGAA TTTCGCGAGG CAGGCGGCGC GCTCAAGGAT
CTGTCGTTCG ACACCATTTC GGCGGCTGGC CCGAACGGCG CGCTGCCGCA TTACAAGGTC
GACGAAACCA CCAACCGCAG GATCGAGAGG GGCACGCTCT ATCTGGTCGA TTCGGGCGGA
CAATATGCCG ACGGCACGAC CGACATCACG CGCACGATCG CGATCGGGGC GCCCAGCGCC
GAAATGCGGC GCCGCTTCAC GCAGGTGCTG AAGGGTCATA TCGCGCTGGC CACCGCGCGC
TTTCCCAAGG GCACACGCGG CAGCCAGCTG GACATCCTCG CGCGCCAGTA TCTGTGGGCC
GACGGGGTCG ATTATGCGCA TGGCACCGGG CATGGCGTCG GCACCTATCT CGCGGTCCAC
GAAGGGCCGC AGCGGATCGC CAAGCCGGCG GGCGGACAGG CGGGGACCGA GGAGCCGCTG
CACGCGGGCA TGATCCTGTC GAACGAGCCC GGCTATTACA AGGCGGGGCA TTTCGGCATC
CGCATCGAAA ATCTGGTGAT CGTCGTGCCG CAAGAGATCG ACGGCGCCGA GGAAGAGATG
CTGGGGTTCG AGACGATCAC CTTTGCGCCG ATCGCGAGAG ATCTGGTCGA CGTGGCGCTG
CTGTCGTCCG CCGAGGCCGA CTGGCTCGAC GCCTATCATG CCGCGGTGTT CGAAAAGCTG
TCGCCGGGAA TGGACGAGGC GATGCGCGAC TGGCTTGCCG CCGCCTGCGC TCCGCTCGAC
CGCACCCCTG CCGCGCTCGC GGCCTGA
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| Protein sequence | MSSPVHAERL ARVRAELKAR GLDGFIVPIS DEHMSEYVGA YAQRMAWLTG FGGSAGTAAV
LPEKAAVFVD GRYTVQVRDQ VDGSLFDYVG VPQSSVAEWL GSHVSAGQRV GYDPWLHGID
WVRGLEKALA AKGASLVAVD KNPVDAAWDD QPAPSNAPVS VYDTALAGQS AVEKRGVIAD
WLKAKGLDTT VMTALDSIAW TFNIRGEDVS HTPVGLAFAL LHADATADLF IAPEKITDAV
RAHLGNSVRI HDRSAFEGAL AGLAGKKVAV DPDRAVAAIF TALENAGVQV ERHRDPAVLP
KAIKNQVELS GTRAAHLRDG VAVSRFLKWM EEVAPQGGLD ELGAAAKLRE FREAGGALKD
LSFDTISAAG PNGALPHYKV DETTNRRIER GTLYLVDSGG QYADGTTDIT RTIAIGAPSA
EMRRRFTQVL KGHIALATAR FPKGTRGSQL DILARQYLWA DGVDYAHGTG HGVGTYLAVH
EGPQRIAKPA GGQAGTEEPL HAGMILSNEP GYYKAGHFGI RIENLVIVVP QEIDGAEEEM
LGFETITFAP IARDLVDVAL LSSAEADWLD AYHAAVFEKL SPGMDEAMRD WLAAACAPLD
RTPAALAA
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