Gene Sala_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2980 
Symbol 
ID4083063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3123537 
End bp3124163 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID638011365 
Productankyrin 
Protein accessionYP_618018 
Protein GI103488457 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.362189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0382606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCC GCGCCGCGTT CCGCCTTGCC GCTTTCGCTC TCGTCCCGCT TGCCGCCGCG 
GGGCTGGTCC ATGGCCCGGC GCAGGCGCAG TTCCGCGGCG GCTATGCCTT TCTGCAAGCG
GTCGAGAATC GCGACGGGAA CAAGGCGACC TCCGCGCTCC AGGACGATCC GACGCTGATC
AACACGCGCA ATGTGGACAC GGGCGAGACC GCGCTGATGA TCGTCACCAA GCGGCGCGAC
ACCAGCTGGC TGCGCTTTCT GCTCGCCAAG GGCGCCGATC CGGCGATCGC CGACCGCAAT
GGCATGACGC CGCTGATGCA TGCCGCGCTG CTCAACTATA CCGACGGAGC CGACGAATTG
CTCAAGCAAA AGGCGCCGGT CGACCAGGCG AACCGGCGCG GCGAGACCGC GCTGATCCTG
GCGGTGCAGT CCAAAAATGG CGCGATGGTC CGCCTGCTCA TGCGGCGCGG CGCCAATCCC
GACAAGACCG ACCATGTCGC CGGCATGTCG GCGCGCGACT ATGCCAGGCG CGATGACCGG
ACGGGCCAGC TGCTCGCGCT GCTCGACACA CAGGCCGATG CCGATGCGCC CAAGCGCGAA
TATGGGCCGA CCTTTGGCCC CAATTAA
 
Protein sequence
MFRRAAFRLA AFALVPLAAA GLVHGPAQAQ FRGGYAFLQA VENRDGNKAT SALQDDPTLI 
NTRNVDTGET ALMIVTKRRD TSWLRFLLAK GADPAIADRN GMTPLMHAAL LNYTDGADEL
LKQKAPVDQA NRRGETALIL AVQSKNGAMV RLLMRRGANP DKTDHVAGMS ARDYARRDDR
TGQLLALLDT QADADAPKRE YGPTFGPN