| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2976 |
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| Symbol | |
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| ID | 4083059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3119435 |
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| End bp | 3121633 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011361 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_618014 |
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| Protein GI | 103488453 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.706338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0468757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGAAG GAATACGGGC TTTGCGCCGC GAGAGACAGC AAGCTTCGTC GAATAAATCG
TCATCGCCCG GTAAAGGCAG CGGCTCGCCC CGCGGTGCGC CGTCACGCCT GCGCCTGTGG
CTGCGCCGCA TCTTTCGCTG GGGGCTGGGG CTCGCCGTCG TCGGCCTCGT CGCGCTGGGC
GTCGCGGTCG GCATCGCCGT GCAGCGAATG CCGAGTTTCG AGGAGCTCAA GAAATCGCCC
GCGGGGCAGA CGATCCGCGT CCGCGCCGCC GACGGCACCG TCTTTCTGTC ACTGGGCCCC
AATTACGGCC GCTGGCTGTC GCTCGGCGAA ACGCCGCAGG TGATGCAGGA TGCGATGGTC
GCGGTCGAGG ATCGCCGCTT TCGCTATCAT CCCGGCCTCG ATCCGGTCGG CATGGCGCGC
GCCGCGGTCT TTGCCGTCGA GAATTACGGC ACCGGGCGGC GGATGCAGGG CGCCTCGACG
ATCACGCAGC AGCTGGCGCG CAATATCTTC CTGTCGAACA GCTATACCTG GGCGCGCAAG
GCGCGCGAGA TGATCCTCGC GCTCGCGCTC GAATGGAAAT TCTCGAAAGA CCAGATCCTC
GAACTCTATC TGAACAAGGT CTATTTCGGC GGCGGCAGCT ATGGCATCGA CGCCGCGTCG
AACAGCTTTT TCGGTCATAG CGCGACCGAA ATGTCGCTGT CGGAAGCCGC GGTGATCGCC
GGGCTCGTCA AGGCGCCGTC GCGCTATTCG CCGACCGCCG ATGCCCAGGC CGCGCTCGGC
CGCGCCGACG TCGTGCTCGA CGTCATGGTC GATGCGGGGG TCATCACCCA CGCGCAGGCC
GAAGCAGCGG AACCCGCGAA TGTTCAGCTT GCCAAGGAAA CGGGGCAGAA CAGCGCGCGT
TACTTCACCG ACTGGGCGTT GCCGCAGCTC GACATGCTGA TCGACGAAGG CAGCGAGGCG
CTCGACGTCT ACACGACGAT CGACCTCAAC ATGCAGCGCG CCGCGACGGC ATCGATCCAG
GCGAACACGC CGCCGGGCGT GCAGGGCGCG CTCGTGTCGC TCGACCGCGA CGGCGCGGTG
CGCGCGATGG TCGGCGGCCG CGACTATGTG ACCTCCAACT ATAATCGCGC GACGCAGGCG
CTGCGCCAGC CGGGATCGGC GTGGAAGCTG TTCGTCTATA TGGCCGCGCT CGAGGCGGGC
TATAAGGTCG ACGATCCCGT GGTCGACGAG CCGGTGACGA TCAACGGCTG GAGCCCGCGA
AACTCGTCGG GCCGCTTTGC GGGCACGATG GATTTGCGCA GCGCCTTTGC CTATTCGGTC
AACACCGTCG CGGCCAAGCT GGGCGATGAA ATCGGCTTTT CGGCGGTTGC CAACATGGCA
CGCCGTTTCG GCATCACCAC GCCCGTCAAC ACGCACCCGT CGATGGTGCT GGGAAGCGCC
GAGGTGCGCG TGATCGACAT GACCGCCGCC TTTGCCGCGG TGGCGCGCGG GGGCGTGTCG
GTGCAGCCCT ATGGCATCAC CAGGGTGACG ACCGCGAGCG GCGAGCTGCT CTATCAGCGG
CCTGCCGAGC GCGGCAGCAC GCTGGTCGAT CCCTGGGTGG CGGCCGGGAT CACCGACCTG
CTCCAGACCG CGGTCAACAC CGGCACCGGG CGCGCGGCGC AGATCGGCCG TCCGGTCGCG
GGCAAGACAG GGACGACGTC GAGCAACAAG GACGGGTGGT TCCTCGGCTT TTCGAGCGGC
CTTACGACGG GCGTGTGGAT GGGCCGCGAC GATGCGAAAC CCGTCGGCGG GTTGCAGGGC
GGCCGCGCGC CGGCCAAGGC CTTCGCCGAC TATATGCGCG TCGCGGTTGC GCGGCGCCCG
GTCGAGCAAT TCGATACCGA GGTCGTGCTG CCCGAATGGC AGTTGGAGGA CGAGGGCGAG
GCCTATCTGG GCGAGCCGGG CGAGGAAGGC ATGCTCGTCG ACGAAAATGG CATGCCGATC
GAACTGCCCT ATGACAGCCG CCCGCCCGAC AGTTTCGGCA CGCCGCCCGC GGTCGAAGCT
CCGGTGCTCG ACCAGCAATG GATCGAGGAG CAGACGGGGC GCCGCCCGCC CGCAAACGGG
GGCGGCGGCC AGCCCAAGGT GATTTCGGTC CCGAAAGCGC CGCCGCCCCA GGTCCGCGTG
CCGCCGCCGC GGCCCGCTCC CGTCGAACCC GCGGATTGA
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| Protein sequence | MREGIRALRR ERQQASSNKS SSPGKGSGSP RGAPSRLRLW LRRIFRWGLG LAVVGLVALG
VAVGIAVQRM PSFEELKKSP AGQTIRVRAA DGTVFLSLGP NYGRWLSLGE TPQVMQDAMV
AVEDRRFRYH PGLDPVGMAR AAVFAVENYG TGRRMQGAST ITQQLARNIF LSNSYTWARK
AREMILALAL EWKFSKDQIL ELYLNKVYFG GGSYGIDAAS NSFFGHSATE MSLSEAAVIA
GLVKAPSRYS PTADAQAALG RADVVLDVMV DAGVITHAQA EAAEPANVQL AKETGQNSAR
YFTDWALPQL DMLIDEGSEA LDVYTTIDLN MQRAATASIQ ANTPPGVQGA LVSLDRDGAV
RAMVGGRDYV TSNYNRATQA LRQPGSAWKL FVYMAALEAG YKVDDPVVDE PVTINGWSPR
NSSGRFAGTM DLRSAFAYSV NTVAAKLGDE IGFSAVANMA RRFGITTPVN THPSMVLGSA
EVRVIDMTAA FAAVARGGVS VQPYGITRVT TASGELLYQR PAERGSTLVD PWVAAGITDL
LQTAVNTGTG RAAQIGRPVA GKTGTTSSNK DGWFLGFSSG LTTGVWMGRD DAKPVGGLQG
GRAPAKAFAD YMRVAVARRP VEQFDTEVVL PEWQLEDEGE AYLGEPGEEG MLVDENGMPI
ELPYDSRPPD SFGTPPAVEA PVLDQQWIEE QTGRRPPANG GGGQPKVISV PKAPPPQVRV
PPPRPAPVEP AD
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