Gene Sala_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2871 
Symbol 
ID4080664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3021878 
End bp3022666 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID638011255 
Producthypothetical protein 
Protein accessionYP_617909 
Protein GI103488348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.593906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAAGG GAAAAGCTGC GCGCGCCTTT AGGGGCCGCG ACGAACGAAC GCAAGCACGG 
GCGCTTGACG CTGCGCCCCG TGCCGACCAT CGAGCGGCGA TGACCCGCGC GCTCCACGCT
TTCCTGCTCG CGATCCGCGA CCTTGCCAGC CCGCGCGCGC GCGCCATCCT TGCGCAGAGC
CTGGCGCTCA CCTTGCTGCT CCTCGCGCTG TCGGGCGCCG CGATCTTTTT CAGCGCGCGC
TGGGCGCTCG AACATTGGAG CTGGCTGGAT GCGGCGACGC GCGACCTGGC GAGCATCCTC
GCCGTCCTTG GTCTGCTCGC GGGGGGCTGG CTGCTGTTTC GCGCGGTCGC GATCATCGTC
ATCGGCCTGT TCGCCGACGC AATCGTCGCC GATGTCGAGG GGCGCCATTA TCCCGCCGCC
GCGGCGCGCG CGGTCGATGT CGGCTGGGGC CAGAACATCC GCCTCGCGCT GGCGTCGCTC
GGCCGGCTGA TCGGCGGCAA TCTGCTCGCG CTGCCGCTCT ATATCCTGCT GCTCGTCACC
GGCATCGGCA CGCCGATCCT TGCGCTGCTC GTCAACGCGC TGCTGCTGGG CCGCGATCTG
GAGGCGATGG TGCTCGCGCG CCATCCGGGT CGCCCGCGCT TCGGCCGCAG CGCGCGCTGG
CCGCTCGGCC TGCTGTCCGC CGCAGGCTTT GCGATGCCCG TCGCCAATTT GTTGGCGCCG
CTGCTCAGCG CCGCTATGGC CGTCCACATG CTGCACCTCG GCGACGGGAA CAAGAAAAAT
GACCAATAA
 
Protein sequence
MLKGKAARAF RGRDERTQAR ALDAAPRADH RAAMTRALHA FLLAIRDLAS PRARAILAQS 
LALTLLLLAL SGAAIFFSAR WALEHWSWLD AATRDLASIL AVLGLLAGGW LLFRAVAIIV
IGLFADAIVA DVEGRHYPAA AARAVDVGWG QNIRLALASL GRLIGGNLLA LPLYILLLVT
GIGTPILALL VNALLLGRDL EAMVLARHPG RPRFGRSARW PLGLLSAAGF AMPVANLLAP
LLSAAMAVHM LHLGDGNKKN DQ