Gene Sala_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2870 
Symbol 
ID4080663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3021514 
End bp3021888 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content72% 
IMG OID638011254 
Producthypothetical protein 
Protein accessionYP_617908 
Protein GI103488347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.545787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA ATAGACGGTT GGCTGCCGCT GCGGGCCTGG CCCTGACGCT CGGCGCATGC 
GCGGGCCCGA CGATCCCGCG CCCCGCCGCG ACCCCGCCCG CCGCCGCGAC CCCGCCCGTC
GTGCGACCGG TGCAGAACAA CGCGCTGATC GGCAGCAGCG TCGACGCGGT CGGGCGGATG
TTCGGCAAGC CGCGACTCGA CGTGACCGAA GGCGCGGGGC GCAAGCTGCA GTTCGCGGGA
CCGCGCTGCA TCCTCGACAT TTATTTCTAT GCCCCGCGCG CGGGCGCCGA TCCCGTTGCC
ACCCATGTCG ATGCGCGCGT GCCCGACGGT CGCAACGCCG ACGTGAACAG TTGCGCCGAG
GCGCTACGGC GCTAG
 
Protein sequence
MTNNRRLAAA AGLALTLGAC AGPTIPRPAA TPPAAATPPV VRPVQNNALI GSSVDAVGRM 
FGKPRLDVTE GAGRKLQFAG PRCILDIYFY APRAGADPVA THVDARVPDG RNADVNSCAE
ALRR