Gene Sala_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2859 
Symbol 
ID4080652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3008470 
End bp3009294 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content70% 
IMG OID638011243 
Producthypothetical protein 
Protein accessionYP_617897 
Protein GI103488336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.363311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC TTTTCAAAGC CTTTCGCCTG CTTGCCGTGG GCGCGCTCGT CGCGCTGTCC 
GTGCCTGCGC ACGCCGCGGG CGATCTGCTC GTCGCGCCGA CGCGCATCAT CCTCGACGGA
TCGCGCGGGA CCGAGGTTGT GCTGAGCAAT ATCGGCGCCG AACCCGCGAC CTACCGGATC
AGCCTCGAGA TCAAGCGGAT GACCGCCGCG GGCGGGCTCG CCGAAATCGC CGAAGCCGAT
GCGAACGACG TCGAAAGGGC GGCGCTGAGC ATGATCGCCT TCAGCCCGCG CCGCATCACC
CTGCCGCCGA ATCAGCCGCA GGTCGTCCGC GTCGGCGTAC GCGTTCCCGA AGGGACGCCG
CCGGGTGAGT ATCGCGCGCA CATGCTGTTC CGCGCGGTGC CCGACGCGGT CGCCGCAACC
GCCGCGCCCA AACCCGCGAG CGCGGGCGTG TCGATCGCGC TGACGCCGAT TTATGGCATC
ACCATCCCGG TGATCGTGCG CGTCGGCGAC CTGGGCGCGG AGGCGGCGAT CGGCAAGGCG
TGGGTGAGCG AGAGCGACGA GGGCGCGGCG TTCAATTTCG ACCTGACGCG GACGGGCAAC
CGCTCGGTCT ATGGCGATAT CGAGGTGACG CGGCCGGGGG TGGCCGAGCC GCTGCTCGTC
GCGCGCGGCA TCGCGGTCTA TCCCGAAGTC GCCGGGCGCC AGGTGTCGCT GCGCGTGCCC
GACGATGTCG CGGCGAAGCT CAAGGGGCCG GTGCGCATTC GTTATACCGA GGATCGCGAA
ATCGGCGGCG GCACGATCGA CGAGGCCGAG CGGGTGGTGA AGTGA
 
Protein sequence
MLRLFKAFRL LAVGALVALS VPAHAAGDLL VAPTRIILDG SRGTEVVLSN IGAEPATYRI 
SLEIKRMTAA GGLAEIAEAD ANDVERAALS MIAFSPRRIT LPPNQPQVVR VGVRVPEGTP
PGEYRAHMLF RAVPDAVAAT AAPKPASAGV SIALTPIYGI TIPVIVRVGD LGAEAAIGKA
WVSESDEGAA FNFDLTRTGN RSVYGDIEVT RPGVAEPLLV ARGIAVYPEV AGRQVSLRVP
DDVAAKLKGP VRIRYTEDRE IGGGTIDEAE RVVK