| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2822 |
|---|
| Symbol | |
|---|
| ID | 4080403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2977162 |
|---|
| End bp | 2977632 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638011206 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_617860 |
|---|
| Protein GI | 103488299 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0935176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTC GTCGTCGTCC TGAACGCCGC GAAATCCTGC CCGATCCCCG TTTCGGGGAT
GTCGTGCTGT CGAAATTCAT GAACAGCGTC ATGCTGGACG GGAAAAAGTC GGTCGCCGAA
AGCATCGTAT ACGGTGCTCT GGAAGCGGTT GAAGCCCGCG CCAAGAAGGA ACCGCTCGGA
GTGTTTCACG AGGCGCTCGC GAACATTCGC CCGAACATCG AAGTGCGCAG CCGCCGCGTC
GGCGGTGCGA CCTATCAGGT TCCGGTCGAA GTCCGTCCCG ACCGCGCACA GGCGCTCGCA
ATCCGCTGGC TGATCACCGC CGCGCGTAAC CGCAGCGAAA CCACGATGGC CGCGCGCCTG
TCGGGCGAGT TGCTCGACGC CTCGAACAAC CGCGGCAATG CGGTCAAGAA GCGCGAAGAC
ACGCACCGCA TGGCCGAAGC GAACCGCGCT TTCAGCCACT ACCGCTGGTA A
|
|---|
| Protein sequence | MARRRRPERR EILPDPRFGD VVLSKFMNSV MLDGKKSVAE SIVYGALEAV EARAKKEPLG
VFHEALANIR PNIEVRSRRV GGATYQVPVE VRPDRAQALA IRWLITAARN RSETTMAARL
SGELLDASNN RGNAVKKRED THRMAEANRA FSHYRW
|
|---|
| |