Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2821 |
Symbol | |
ID | 4080402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2974972 |
End bp | 2977065 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638011205 |
Product | elongation factor G |
Protein accession | YP_617859 |
Protein GI | 103488298 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.114421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA GCCATCCGCT CGAACGTTAT CGCAATTTCG GTATCATGGC GCACATCGAC GCCGGCAAGA CCACGACGAC CGAGCGCATC CTCTATTACA CCGGCAAATC CTACAAGATC GGCGAAGTCC ATGACGGCGC CGCGACGATG GACTGGATGG AGCAGGAACA GGAGCGCGGC ATCACCATCA CCTCCGCCGC GACGACCTGC CTGTGGAAGG CCGATGAGGG CAAGGGCCCC GAACATCGCC TGAACATCAT CGACACCCCC GGACACGTCG ACTTCACGAT TGAAGTCGAG CGCTCGCTTC GCGTCCTCGA CGGCGCGGTC GCGGCGTTCG ATGGCGTGGC GGGCGTCGAG CCGCAGTCGG AAACCGTGTG GCGCCAGGCC GACAAATACA AGGTTCCGCG GATGTGCTTC ATCAACAAGC TCGACCGCAC CGGCGCCAAT TTCTATTATT GCGTCCAGAC GATCATCGAT CGCCTCGGCG CGACCCCGGC CGTCCTCTAT CTGCCCATCG GCGCCGAATC GGACTTCAAG GGCCTCGTCG ACCTCGTCAA CGAACGCGCA ATCATCTGGA AGGACGAAAG CCTCGGCGCC GAATTCTTCT ATGAAGACAT CCCCGCCGAC CTCGCCGACA AGGCGGCCGA ATATCGCGAA AAGCTCGTCG AACTTGCTGT CGAACAGGAC GATGAGGCGA TGGAAGCCTA TCTCGAAGGC AATGTCCCCG ACGTCGCGAC GCTCAAGAAG CTGATCCGCA AGGGCACGCT CAATCAGGCG TTTGTGCCCG TGCTGTGCGG CTCGGCGTTC AAGAACAAGG GTGTCCAGCC GCTGCTCGAC GCGGTCGTCG ACTATCTGCC CTCGCCGCTC GACATCCCCG ACGTGCAGGG CATCAACCCG ACCACCGAAC AGCCCGATTC GCGCGCGACG TCGGATTCGG CGCCGCTGTC GATGCTCGCG TTCAAGATCA TGAACGACCC GTTCGTGGGC TCGCTCACCT TCGCCCGCAT CTATTCGGGC ACGCTGACCA AGGGTAGCTA TCTGAACTCG GTCAAGGACA AGAAGGAAAA GATCGGCCGT ATGCTGCTGA TGCACGCAAA CAGCCGCGAG GACATCGAGG AAGCCTTTGC CGGCGACATC GTCGCGCTGG CGGGCCTCAA GGAAACCACG ACCGGGGACA CGCTGTGCGC ATCGAACGCG CCGATCATCC TCGAGCGGAT GGAGTTCCCC GAGCCGGTGA TCGAGCTGTC GGTCGAACCG AAGACCAAGG CCGATCAGGA AAAGATGGGT ATTGCCTTGA GCCGTCTTGC GGCCGAGGAT CCCTCGTTCC GCGTGTCGAC CGACCATGAA TCGGGCCAGA CGATCATCAA GGGCATGGGC GAGCTTCACC TCGACATCCT CGTCGATCGC ATGAAGCGCG AGTTCAAGGT CGAGGCGAAC GTCGGCGCCC CGCAGGTGGC GTATCGCGAA TCGCTCGCGA AGCCGGTCGA CGTCGACTAT ACCCACAAGA AGCAGTCGGG TGGTTCGGGC CAGTTCGGCC GCGTCAAGGT CAGCGTCGCT CCCGGCGAAC GCGGTTCTGG CATCACCTTC ATCGACGAGA TCAAGGGCGG CAACATCCCG CGCGAATATA TTCCGTCGGT CGAAAAGGGC ATGCGTGAAG CGGCCGAGAA CGGGCATATG ATCGGCTTCC CGATCATCGA CTTCGAAATC CGTCTCACCG ACGGTGCGTA CCACGACGTC GACTCGTCGG CGCTCGCGTT CGAGATCGCG GGTCGCGCGG CGATGCGCGA AGTCGCGGCG AAGGCCGGCA TCAAGCTGCT CGAGCCGGTG ATGAAGGTCG AAGTCGTCAC CCCCGAGGAG TTCATGGGCG ACGTCATCGG CGACCTCAAC AGCCGCCGCG GGCAGATTCA GGGCACCGAC AGCCGCGGCA ACGCCCAGGT GGTCGAGGCG ATGGTCCCGC TCGCCAACAT GTTCGGCTAC GTCAACCAGC TGCGTTCCTT CACCCAGGGG CGCGCGCAAT ATACGATGCA GTTCTCGCAC TATGAAGAAG TGCCGAACAA CGTCGCCGAA GAAGTGAAGG CCAAGATGGC CTGA
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Protein sequence | MARSHPLERY RNFGIMAHID AGKTTTTERI LYYTGKSYKI GEVHDGAATM DWMEQEQERG ITITSAATTC LWKADEGKGP EHRLNIIDTP GHVDFTIEVE RSLRVLDGAV AAFDGVAGVE PQSETVWRQA DKYKVPRMCF INKLDRTGAN FYYCVQTIID RLGATPAVLY LPIGAESDFK GLVDLVNERA IIWKDESLGA EFFYEDIPAD LADKAAEYRE KLVELAVEQD DEAMEAYLEG NVPDVATLKK LIRKGTLNQA FVPVLCGSAF KNKGVQPLLD AVVDYLPSPL DIPDVQGINP TTEQPDSRAT SDSAPLSMLA FKIMNDPFVG SLTFARIYSG TLTKGSYLNS VKDKKEKIGR MLLMHANSRE DIEEAFAGDI VALAGLKETT TGDTLCASNA PIILERMEFP EPVIELSVEP KTKADQEKMG IALSRLAAED PSFRVSTDHE SGQTIIKGMG ELHLDILVDR MKREFKVEAN VGAPQVAYRE SLAKPVDVDY THKKQSGGSG QFGRVKVSVA PGERGSGITF IDEIKGGNIP REYIPSVEKG MREAAENGHM IGFPIIDFEI RLTDGAYHDV DSSALAFEIA GRAAMREVAA KAGIKLLEPV MKVEVVTPEE FMGDVIGDLN SRRGQIQGTD SRGNAQVVEA MVPLANMFGY VNQLRSFTQG RAQYTMQFSH YEEVPNNVAE EVKAKMA
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