Gene Sala_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2790 
Symbol 
ID4080371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2952246 
End bp2953181 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID638011174 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_617828 
Protein GI103488267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.389161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG ACATCGCGCC GCTCGGCGAA GGCGACCTGG CCACCGCCGA CCGGATCTTC 
CGCCTTGCCT TCGGCACCTT TCTCGGCCTT CCCGATCCGG TACAGTTCAT GGGCGACGCC
ACGCTCGTCG CGCCGCGCTG GCGGGCAGCG CCCGAGGCGA GCTTCGGCGC CTATATCGAT
GGCGAACTCG TCGGTTCGAA CCTCGCGGCG CGCTGGGGCC GCTTCGGCTT CTTCGGTCCG
CTGACCATCC ATCCCGACCA TTGGGGCAGA GGCATCGCCA GCCGGCTGGT CGCGGCGACA
ATGGAGGCAT TCGACCGCTG GGGCATTGCT CAGCGCGGAC TGTTTACCTT TCCCGACAGT
GCCAAGCATA TCAGCCTTTA TGGCAAGTTC GGTTTTGTCC GCCAGGCCCC GACCCGGGTG
ATGGTGCGTG GAACGGGCGC GACAAAGGGC ACCGCCGCAC GGGCGTCGGC GATGGATGCC
GATGCGTTCG CGAGCGCGAT GCTGGCGGCG CAGGCGCTCA CCGCCGCGAT CGAGCCGGGT
CTGGACCTCT CGAGCGAGAT CGCCGCCGTG GCGGTGCAGC GCCTCGGCGA TACGCTGTTC
CTCCATGACG ACGGGGGGCT GGCGGGCTTT GCCGTCTGCC ATGTCGGCGC GGGCAGCGAG
GCAGGCAGCG ACGCCGCCTA TGTCAAGTTT GGCGCGGTCC GCCCCGGCGC CGGCGCATCC
GGTCGTTTTG CCCGCCTGAT CGACACCTGC GACGCCTTTG CCGCATCCGC GGGCGCAGCA
CGGCTGATTG CAGGGGTCAA CGCCGCGCGC AACGAAGCGC TGCGGATGAT GGTCGACGCA
GGTTTTGCTC CGATGATCGA AGGTGTCGCG ATGCAGCAGC CCGACCGACC GGGGTTCAAT
CGCCCCGATT GTTTCGTGAT CGACGACTGG CGCTAG
 
Protein sequence
MIVDIAPLGE GDLATADRIF RLAFGTFLGL PDPVQFMGDA TLVAPRWRAA PEASFGAYID 
GELVGSNLAA RWGRFGFFGP LTIHPDHWGR GIASRLVAAT MEAFDRWGIA QRGLFTFPDS
AKHISLYGKF GFVRQAPTRV MVRGTGATKG TAARASAMDA DAFASAMLAA QALTAAIEPG
LDLSSEIAAV AVQRLGDTLF LHDDGGLAGF AVCHVGAGSE AGSDAAYVKF GAVRPGAGAS
GRFARLIDTC DAFAASAGAA RLIAGVNAAR NEALRMMVDA GFAPMIEGVA MQQPDRPGFN
RPDCFVIDDW R