Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2779 |
Symbol | |
ID | 4080342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2935995 |
End bp | 2937632 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638011163 |
Product | hypothetical protein |
Protein accession | YP_617817 |
Protein GI | 103488256 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.989391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGG CGCGCCGGCC TTCGACCTCG AATTGCTGCG CTGGCGCAGC GGCGCGGCGG GCGCGCGCTG GCGACTGGAC TGGAACCATG ACGAACAAAG TTTTGGGCAA GGCGTCGGGG ACGCGGCGCT ATCTGGCGCT CTTCTTCCCC TTCCTGCCCG CCGAGCGATG GCTTCGCACG GCGCCAAAGC CGCCTGACGC ACCGCTGGTC TTTGCCGCGA AGCAGCGCGG CGCGATGCGT CTTGCGAGCG TCGATGCGGC GGCGCTGGCG GTCGGGCTGC GTCCCGGCAT GCCGCTTGCC GATGCGCGCG CGCAGGCGGG CGAACTTGCG GTCGTTCCGC ACGATCCGAT GCTCGACCAG GCCTGGCTCG ACCGGCTCGC ACAGGGCTGC GCGCGCTATA CGCCGCTCGT CGCGCTCGAT GCGCCCGACG GGCTGATCCT CGACATCGCG GGCGCCGCGC ATCTTTTCGG CGGCGAGGCC GGACTGGTCG CCGATGTCGA GATGCGCTTC GCGCGCCTTG GCATGACGCT CCGCCATGCG CTCGGCCCGA CCGCCGATGC GGCGCGCGCG CTCGCGCGCT ATCAGGCGCG CCCCGCGCCC GACGAAGCGC AGGCGATCCG CCGCCTGCCT GTCGCCGCGC TCGAACTCGA AGCCGAAGCG ACGACCGCGC TGGTGCGCGC GGGATTGAAG ACGATCGGCG ACCTTGCAAG CCGCCCGATG GCGAATCTCG CCGCGCGCTT CGGCGCCGAC GCCGCGATGG CGCTGCGTCG GATGTTGGGC GACGCGCCGA GCCCGCTCGA CCCGCGCGTC ACGCCGCCCC CCGTCGCTGC CGAGCGCCGT TTCGCCGAAC CGCTCGGCAG CACGGCGCAC GCCGCCAAGA TGCTCGCCGA ACTCGCCGGC GAAGCGATCG AAACCCTCGT CAAGCGTGGC AAGGGCGGGC GCCATTTTGG CGCGACCTTC TTTCGCAGCG ACGGCCTTGC GCGCAGCATC GCGATCGAGA CGGGCCATCC GACGCGCGAC GTCGGCCTCG TCATGCGCCT GTTCGCCGAG CGGATCGACA GCCTCGCCGA TCCGCTCGAC CCCGGTTTCG GTTTCGACAT GATCCGCCTC ACGGTGACAC GGCTCGAAGC GCTTGGAGCG AGCCAGCTCA AGCTCGAAGG CGGTACGGCC AAGGAGGCCG CGATCGACGA ACTCGCCGAC CGGCTCGCGA CACGGCTGGG GCGCGGGCGG GTACGGCGGC TGCGTCCGGC CGACACGCAT ATTCCCGAGC AGGCACAGCT CGAACTGCCC GCGATCGACG CGCCGCCGCC CCTGCCCTGG CAGGCGGGTG ACCCCGGCGA GCCGCCGACG CGCCCCTTCC ATCTCTTTGA CCCGCCGCAG CCGATCGAGG TGATCGCCGA GGTGCCCGAC GGTCCGCCGC AGCGCTTTCG CTGGCGCCGC GCCCTGCACG CGATCCGCCG CTATGAAGGC CCCGAGCGCA TCGCCGCCGA ATGGTGGCGC CGCCGCGACA ATGGCGGACT GACGCGCGAC TATTACCGCG TCGAGGATGC ACAGGGCCGC CGCTTCTGGC TCTTTCGGCA CGGGCTTTAC GACGAAAAGC CCGATCCGCG CTGGTATATC CACGGGGTCT TCGCATGA
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Protein sequence | MRPARRPSTS NCCAGAAARR ARAGDWTGTM TNKVLGKASG TRRYLALFFP FLPAERWLRT APKPPDAPLV FAAKQRGAMR LASVDAAALA VGLRPGMPLA DARAQAGELA VVPHDPMLDQ AWLDRLAQGC ARYTPLVALD APDGLILDIA GAAHLFGGEA GLVADVEMRF ARLGMTLRHA LGPTADAARA LARYQARPAP DEAQAIRRLP VAALELEAEA TTALVRAGLK TIGDLASRPM ANLAARFGAD AAMALRRMLG DAPSPLDPRV TPPPVAAERR FAEPLGSTAH AAKMLAELAG EAIETLVKRG KGGRHFGATF FRSDGLARSI AIETGHPTRD VGLVMRLFAE RIDSLADPLD PGFGFDMIRL TVTRLEALGA SQLKLEGGTA KEAAIDELAD RLATRLGRGR VRRLRPADTH IPEQAQLELP AIDAPPPLPW QAGDPGEPPT RPFHLFDPPQ PIEVIAEVPD GPPQRFRWRR ALHAIRRYEG PERIAAEWWR RRDNGGLTRD YYRVEDAQGR RFWLFRHGLY DEKPDPRWYI HGVFA
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