| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2761 |
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| Symbol | |
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| ID | 4080246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2909783 |
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| End bp | 2911033 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638011144 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_617799 |
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| Protein GI | 103488238 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.580196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGTGC ATCGCGAACT GCTCGACGAA ATCAATCTGA CCCAACTGGA AAAACTGTCG
CGGGCGCAGG TCGAAACCGA AGCGGGCGAC CTGATCGCGG ACATTCTGAA CCGCCATCAG
CTGGCGCTCA ACGCCAGCGA ACGGCGGGCG ATGGTGAGCG ACGTTCTCGA CGAACTGCTG
GGGCTGGGAC CGCTCGAACC GCTTTTGCAG GACGAGACGA TCACCGACAT ACTGGTCAAC
GGGCACGATA TCGTCTTCGT CGAGCGGCGC GGCCTGCTGC AGCGCGTCGA CACGCGCTTC
AAGGACGAGA GGCACCTTTT CCGCATCATT CAGAAAATCG CGAGCGCGGT CGGACGACGC
ATCGACGAAT CGTCGCCCTT CGTCGACGCC CGGCTTGCCG ACGGGTCGCG CGTCAACGCG
ATCGTCCCGC CCCTGGCAAT CGACGGTTCG CTGCTTTCGA TCCGCAAATT CGCCCGCATT
CCGATCAATA TGGCGCGACT CGTCGAACTG GGCAGCGTGC CCTCGGCGGT CGCCGAGGTG
ATGGAGGGGA TAGTAAGAGC GCGCCGGAAC ATACTCATCT CCGGCGGCAC GGGGTCGGGC
AAGACGACCT TGCTCAACGC CATTTCGGCC TTCATCGACG AGCATGAGCG CATCGTGACG
ATCGAGGATT CGGCCGAACT GCAATTGCAG CAGGAACATG TCGCGCGGCT GGAGACGCGC
CCCGCCAATA TCGAAGGCAG GGGAGAGGTC ACGCAGCGCG ATCTGGTCAA AAATGCCCTG
CGCATGCGCC CCGACCGGAT CATCGTCGGC GAAGTCCGCG CCGGCGAGGC CTTTGACATG
CTCCAGGCGA TGAACACCGG CCACGATGGG TCGATGACCA CCGTCCACGC CAACACGGCA
CGCGATGCGC TGTCGCGCGT CGAACAGATG ATCGGCATGA GCGGGATCGA CATGCCGCCG
CGCGCGGCGC GCGGGCAGAT CGCATCGGCG ATCAACATCG TGATCCAGAT CGGCCGACTT
TCCGACGGCC GCCGCCGTCT GCTCAGCCTG TCGGAAATCA CCGGGATGGA AGGCGACGTC
ATCACCATGC AGGAGATTTT CCGGTTCCGC ATGGCGGGGC GCGACGCCGA CAACCGCGTC
GTCGGCCATT TCGAGGCGAC GGGCATCCGG CCCAAGTTCC TGGAAACGCT GTCGGCGCAC
GGCGTCGAGC TGTCGCCCGA TCTGTTCCGG CCCGACCGGC GGATCGATTG A
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| Protein sequence | MQVHRELLDE INLTQLEKLS RAQVETEAGD LIADILNRHQ LALNASERRA MVSDVLDELL
GLGPLEPLLQ DETITDILVN GHDIVFVERR GLLQRVDTRF KDERHLFRII QKIASAVGRR
IDESSPFVDA RLADGSRVNA IVPPLAIDGS LLSIRKFARI PINMARLVEL GSVPSAVAEV
MEGIVRARRN ILISGGTGSG KTTLLNAISA FIDEHERIVT IEDSAELQLQ QEHVARLETR
PANIEGRGEV TQRDLVKNAL RMRPDRIIVG EVRAGEAFDM LQAMNTGHDG SMTTVHANTA
RDALSRVEQM IGMSGIDMPP RAARGQIASA INIVIQIGRL SDGRRRLLSL SEITGMEGDV
ITMQEIFRFR MAGRDADNRV VGHFEATGIR PKFLETLSAH GVELSPDLFR PDRRID
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