| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2744 |
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| Symbol | |
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| ID | 4080229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2892898 |
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| End bp | 2896083 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638011127 |
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| Product | putative outer membrane protein with a TonB box |
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| Protein accession | YP_617782 |
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| Protein GI | 103488221 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.111846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC GTTATTCGAT CGCGGCGAGC CTGATGGCCA TCAGCGCCGC GACTGTCGTT
GCCGCGCCGG TACAGGCGCA GGAAACCAGT TCTTCCGTTC GCGGCACCGT CGAGTCGGCC
AGCGGCCCGG TTTCGGGCGC CAGCGTCACC ATCACTCATG TTCCGTCGGG TACGGTCGCT
CGTTCAACGA CCGACGCATC GGGGAACTTC AGCGCCAACG GCCTTCGCGT CGGCGGCCCC
TTTACCGTCG AAGTGACCGC CGAAGACTAT GAGTCGGCGC AGGTCACCGA CCTCTTTCTC
CAGGCCGGTC AACCCTATCG CCTGCCAATC GTTCTCGAAG ATGCCGCGAT CGTGGTTACC
GCCTCGTCGG TCGGTGGCGC GCTCGAACAG TCGAACGGCC CGATTACGGC ACTGGGTCGC
GAGGCCATCG AAGGCGTCGC CTCGATCAAC CGCGATATCC GCGACCTTGC GCGCCGCGAT
CCGTTGGTCA CCATGGACCT GACCAACGCA CGCACGATCG AAGTGGCTGG CAACAATGGT
CGTCTCAACC GCTTCTCAGT TGACGGCGTG CAGTTCAGCG ACGACTTCGG TCTCAACAAC
GGTGGCCTGC CGACGTCGCG TGGCCCTGTG CCGTTCGACG CAATCGAACA ATTTTCGGTC
AAGGTTGCGC CCTTCGATAT CGCCGAGGGC GACTTTCAGG GCGGCGCAAT CAATGTGGTG
CTTCGCTCCG GCGGCAACAA GTTCCACGGC GGCGCTTTCT TCACCTATAC CGACGACAGC
CTGACCGGCA ACCGTACGCG CGGCCGCGAT ATCTCGTTGG ACTTCGACAG CAAACAATAT
GGCGCCAATA TCAGCGGGCC GATCATCAAG GACAAGCTGT TCTTCATGTT CGCTTATGAA
AAGACCAAGG AAACCGATCC TTTCGACGAC GGTTTCGGCC CCGGCTTTGC CAATCAGGTT
CCCGGCCTGA CACAGGCGGT GATCGACCAG GTCAGCAGCG TCGCACAATC GCGCTACGGA
TACGACACGC TCGGCCTGTC GCCCAACGCG GTCGAGGAAG ACGAGAAGAT TATCGGCAAG
CTCGACTGGA ATATCAGCGA CACCCAGCGT GCCTCGCTGA CCTATATTCG CAACGTGGGC
ACGCAGCAGT TCCAGCAGAA TACGTTCCTG ACGTCGCCCT TTGCGCTCGG TTTCCAGTCG
AACGGCTATG AGCTGGCCGA AGAAGTCAAT ACGGGCATCT TCGAGTTGAA CTCGACCTGG
TCGGACCAGT TCTCGACCAC CTTCCGCGCC TCGTATCGTG ATTATAACCG CGACCAGACC
CCGTTCGGAG GCCGCGACTT TCCTCAGATG GAAGTCTGCA CCGACGCGAC CTCGGCCGGG
TCGGCCACCA GCTGTAACGG CACGCGTCTG TTTTTCGGTC CCGATGTGAG CCGTCATTCG
AACGACCTGA ACACGGAAAA CCTGTCGTTC GACTTCACCG CGCGCCTCGA CGCCGGCGAT
CATTCGCTGC GCTTCATGGC CGGCTATACC GATGTGAGCG TGTTCAACCT GTTCCTGCAA
CGTTCGCTCG GTGACTTCTA TTTCGACAGC CTCGCCGATT TTGCGGCGGG CAACGCCAAT
CGCCTGCGCT ATGCGAACGC GGTGCCCAGC CTGGACCCGA ACGATGCCGC GGCCAGTTTC
GGCACGCAAA ACTACACGTT CGGCATTCAG GACGACTGGC AGGCTACCCC CGACCTGACG
CTGTCGTTCG GGATACGCTA TGACCTGTTC GGCAACGACG CCAAGCCGCC GCTCAACCCG
AATTTCCTCG CTCGTTACGG TTTTCACAAC CGCGAGACCT TCAACGGCCG CGATGTGATC
CAGCCACGCT TCGGCTTCAA CTGGCAGGCG ACCGACAAAC TGATCGTTCG CGGCGGTGTC
GGCATCTTCT CGGGCGGCAC GCCCGACGTT TTCCTGTCGA ACAGCTTCTC GAACACGGGC
CTCCTGACCA ATCTTGTCGA TATCAACCGC TCAAACTGCG CCGCTTCCGC AACCTGCGAC
GCGCTGAACG GAATCGACGA CGGGACGATC CCGGCAAGCG TCAACGACTT CCTGGCGCGC
AACACCGGGT CGCTTGCGCT GGCCCCGACC GACAATATCG ATCCCAAGCT GAAGATCGCG
CGCAAGTGGA AGGCTTCGCT GCAGGCCGAT TATGAAATCG GTGACGGCTG GTTCGTGGGC
GGGCAATTCC TGTACGACAA GAACATCTAT GGCTATACTT GGACAGATTT GCGCTCGGTG
CCGATCGGCA CGCTGCCCGA TGGCCGCACC CGCTATGGCC CGTTTGGCGG CGTCGCAACG
ACCAACCGCG ACCTGCAACT GACCAACAGC GAACGCGGCC GCGCCTTCTT CGCGACGGCA
CGTTTCTCGA AGGCGTTCGA CTTCGGCCTG ACACTCGATG GCAGCTACAC CTATTCGAAC
GTGAAGGACG AAGGGGCGCT GACCTCGTCG ACCGCCTCGT CGAATTACGG CAACAACGCC
TTCGTCGATC CCAACCGCGC CGCCTATGGC CGCTCGATCT ACGAATACAC CCACCAGTGG
AAGGGCGGCA TCGACTTCAA ACGCGAGTTC TTCGGCGACA ACGAAACGCG GATCAGCCTG
TTCGGCGAAT ATCGTTCGGG CCGTCCGTAC AGCGTCACCA TGCTCGACAA CAGCGGTGGT
CGCGGGGCTG TGTTCGGCAC AGTCGGCAAC CTCGGCAACA TGCTGCTATA CGTTCCGACG
GCCGGAGGCG ACCCGAGGGT TACGTTTGAT TCGGCCGCCA GCGAAGCTGC GTTCAACACG
CTGATTTCGG AACTCGGCCT CGAAAAATAT CGCGGTCGGA TAGTGAAGAA GAACAGCCAG
ACTTCGCCCG ACTTCTTCAA GGTCGATCTG CATGTCAGCC AGGAAATCCC TGCCTTCGTC
GGCGATGCGA AGTTCAAGCT GTTTGCCGAT GTTGAAAATG TGCTGAACCT GATCGACAGC
GATTGGGGTT CGCTTCGTCA GGTTTCCTTC CCGTATAATG CCGCAATCGT CCGCGTGGCC
TGCGCGGCGA CCAGCGGGAC CAACTGCACC CAGTATCAGT ACAGCAACGT GCGGGCACCC
AACCAAGTGC TCACCAGCCG CGTGTCGCTG TACGGCGTCC GCGTCGGCGT GCGGGTCAAC
TTCTAG
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| Protein sequence | MKLRYSIAAS LMAISAATVV AAPVQAQETS SSVRGTVESA SGPVSGASVT ITHVPSGTVA
RSTTDASGNF SANGLRVGGP FTVEVTAEDY ESAQVTDLFL QAGQPYRLPI VLEDAAIVVT
ASSVGGALEQ SNGPITALGR EAIEGVASIN RDIRDLARRD PLVTMDLTNA RTIEVAGNNG
RLNRFSVDGV QFSDDFGLNN GGLPTSRGPV PFDAIEQFSV KVAPFDIAEG DFQGGAINVV
LRSGGNKFHG GAFFTYTDDS LTGNRTRGRD ISLDFDSKQY GANISGPIIK DKLFFMFAYE
KTKETDPFDD GFGPGFANQV PGLTQAVIDQ VSSVAQSRYG YDTLGLSPNA VEEDEKIIGK
LDWNISDTQR ASLTYIRNVG TQQFQQNTFL TSPFALGFQS NGYELAEEVN TGIFELNSTW
SDQFSTTFRA SYRDYNRDQT PFGGRDFPQM EVCTDATSAG SATSCNGTRL FFGPDVSRHS
NDLNTENLSF DFTARLDAGD HSLRFMAGYT DVSVFNLFLQ RSLGDFYFDS LADFAAGNAN
RLRYANAVPS LDPNDAAASF GTQNYTFGIQ DDWQATPDLT LSFGIRYDLF GNDAKPPLNP
NFLARYGFHN RETFNGRDVI QPRFGFNWQA TDKLIVRGGV GIFSGGTPDV FLSNSFSNTG
LLTNLVDINR SNCAASATCD ALNGIDDGTI PASVNDFLAR NTGSLALAPT DNIDPKLKIA
RKWKASLQAD YEIGDGWFVG GQFLYDKNIY GYTWTDLRSV PIGTLPDGRT RYGPFGGVAT
TNRDLQLTNS ERGRAFFATA RFSKAFDFGL TLDGSYTYSN VKDEGALTSS TASSNYGNNA
FVDPNRAAYG RSIYEYTHQW KGGIDFKREF FGDNETRISL FGEYRSGRPY SVTMLDNSGG
RGAVFGTVGN LGNMLLYVPT AGGDPRVTFD SAASEAAFNT LISELGLEKY RGRIVKKNSQ
TSPDFFKVDL HVSQEIPAFV GDAKFKLFAD VENVLNLIDS DWGSLRQVSF PYNAAIVRVA
CAATSGTNCT QYQYSNVRAP NQVLTSRVSL YGVRVGVRVN F
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