Gene Sala_2695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2695 
Symbol 
ID4081846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2836263 
End bp2836871 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content64% 
IMG OID638011072 
Productperoxidase-like 
Protein accessionYP_617733 
Protein GI103488172 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.500229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCT TTCCCTCATT GCCGGTCGAT GCCCAGCTCG CCGATGTGTT CCGCAGATTT 
ACCACCGGCG TTCCGGCGCT CCTTTCCTAT CATGACGATA TCCTGCGCGA CGATTCGCCG
CTGACGGTCG CAACGCGCGA GTTGATCGCG GCCTATGTGT CGGGGCTCAA TGCGTGCACC
TATTGTCATG GCTCGCATCT GCTTGCCGCC GAAGCGTTTG GCATCGATCC GACATTGTTC
GAGAGCCTGA TGCAAGATGT CGAGACCGCT GCGATCGATC CGGCGCTTAA GCCGCTCCTT
GCCTTTGTCG CCAAGCTCAC CCGCGAGCCT GCCAAGATCT GCGGCCGTGA CGCGGCGGCG
GTTTATGCCG CGGGCTGGAG CGAGGAAGCA TTGTTCGCCG CGATCAGTGT CTGCGCGCTG
TTCAATCTCA TGAATCGCAT CGTCGAGGGC GCGGGCGTCC GGATCGATCC CCTCGCCGAG
GGCGAGGCTG AGCGCGCGGC GCGCGCGGCG CGACTGGCAC CGGGGGAAAC TGCGTCCGGC
GCCCATGCGG CGGAACGCAG CTATTCGCTG CTGGCCGAGA AATGGGGCCT CGCGACAAGC
AGGACGTAG
 
Protein sequence
MSIFPSLPVD AQLADVFRRF TTGVPALLSY HDDILRDDSP LTVATRELIA AYVSGLNACT 
YCHGSHLLAA EAFGIDPTLF ESLMQDVETA AIDPALKPLL AFVAKLTREP AKICGRDAAA
VYAAGWSEEA LFAAISVCAL FNLMNRIVEG AGVRIDPLAE GEAERAARAA RLAPGETASG
AHAAERSYSL LAEKWGLATS RT