Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2695 |
Symbol | |
ID | 4081846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2836263 |
End bp | 2836871 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638011072 |
Product | peroxidase-like |
Protein accession | YP_617733 |
Protein GI | 103488172 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR01926] uncharacterized peroxidase-related enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.500229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATCT TTCCCTCATT GCCGGTCGAT GCCCAGCTCG CCGATGTGTT CCGCAGATTT ACCACCGGCG TTCCGGCGCT CCTTTCCTAT CATGACGATA TCCTGCGCGA CGATTCGCCG CTGACGGTCG CAACGCGCGA GTTGATCGCG GCCTATGTGT CGGGGCTCAA TGCGTGCACC TATTGTCATG GCTCGCATCT GCTTGCCGCC GAAGCGTTTG GCATCGATCC GACATTGTTC GAGAGCCTGA TGCAAGATGT CGAGACCGCT GCGATCGATC CGGCGCTTAA GCCGCTCCTT GCCTTTGTCG CCAAGCTCAC CCGCGAGCCT GCCAAGATCT GCGGCCGTGA CGCGGCGGCG GTTTATGCCG CGGGCTGGAG CGAGGAAGCA TTGTTCGCCG CGATCAGTGT CTGCGCGCTG TTCAATCTCA TGAATCGCAT CGTCGAGGGC GCGGGCGTCC GGATCGATCC CCTCGCCGAG GGCGAGGCTG AGCGCGCGGC GCGCGCGGCG CGACTGGCAC CGGGGGAAAC TGCGTCCGGC GCCCATGCGG CGGAACGCAG CTATTCGCTG CTGGCCGAGA AATGGGGCCT CGCGACAAGC AGGACGTAG
|
Protein sequence | MSIFPSLPVD AQLADVFRRF TTGVPALLSY HDDILRDDSP LTVATRELIA AYVSGLNACT YCHGSHLLAA EAFGIDPTLF ESLMQDVETA AIDPALKPLL AFVAKLTREP AKICGRDAAA VYAAGWSEEA LFAAISVCAL FNLMNRIVEG AGVRIDPLAE GEAERAARAA RLAPGETASG AHAAERSYSL LAEKWGLATS RT
|
| |