| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2652 |
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| Symbol | |
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| ID | 4081782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2796907 |
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| End bp | 2801097 |
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| Gene Length | 4191 bp |
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| Protein Length | 1396 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011028 |
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| Product | methylase/helicase |
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| Protein accession | YP_617690 |
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| Protein GI | 103488129 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0582946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCG CCTTTGGCGC GAGCGATTCC GAAGGCGCCT GGGACTGGAA AAGCGCCTAC
GACGCCTGCG AGGCCGCCGA AATCCTGTTC CTGCGCCGTT ATGGCCAAGC AATTGTCGGC
CGCGCGGCAC CGAGTGCGCT GGCGCTGATC GAGCGCATCG CCGCTTTGAT GCCCACGCAC
ACCCGCCGCT CGGAAAGCTC TCAAGCTCTG CAACAATTCT CGACGCCGCC TGGCCTTGCT
TTCGTCGCCA GCGTGGCGGC TTCGATCAGC CCCGGCGATC AGGTGCTGGA GCCATCCGCC
GGCACCGGCA TGCTCGCCGT CCACGGCCTG CTGGCGCGGG CGAGGCTCAC GCTTAACGAG
CTCGGCGAGA CCCGCGCGGA ATTGCTGCGG CTGCTGTTTC CGGATGTTCC GGTCTCGGGC
CATGACGCCG CTTCGATCGA CGACCGGCTG CCATCCGACG TCCGCCCGAG CGTCGTGCTG
ATGAACCCGC CCTTCTCGGC GGTCGCGCAT GTCGAGCGCA CTATGAAGGA CGCGGCGCTG
CGCCATATCG CCTCAGCGCT CGCGCGGCTG GAGCCCGGCG GCCGCCTGGT CGCGATCACC
GGGGCAAGTT GCGCGCCCGA TGCGCCAGCG TGGCGTGACG CCTTCGCGCG GTTGCAGGAG
ACGGGGCGCA TCGTATTCAC CGCCGCGATC GACGGCAGGG TCTATGCGAA GCATGGCACG
AAGATCGAGA CCCGTCTGAC CGTAATCGAC AAGCTGCCGG CCGAAGACCT CTGCATCTTC
CCACCGAGCG CGGGCGTTGC CCCGGATACC GCGACCCTGC TCGGCTGGGT TCAGGCACAG
GTTCCGCCCC GTGCGCCCAC CACACCGTCT CCGGTCGCGG CCCTACCGGT CACGGCATCG
GCCTCGCCTG TGCGGACGAA TACGCGCACT GTCGCTGCGG CCCCCAGCCC TTCAGCTCCG
GAGCAGGAAG CGGTCGAACT GGTCTATGAC ATCGTCGACT GGACGCCGCC CGCGGAACGC
CTAGGAGACA GCATCTACGA ACCCTATGCG CTCCAGTCGA TCGCGATCCC CTCTGCGAGC
GCGCATCCGA CGCCATTGGT TCAGTCCGCG GCGATGGCTT CGGTCGCGCC GCCCAAGCCC
TCCTACCGCC CGCATCTGCC GCCGCAGCTC GTGACGCTCG GCATATTGTC CGACGCCCAG
CTCGAATCCG TCATCTATGC GGGCGAAGCA CATTCGGGGC ATCTGTCGGG CGCATGGAAG
GTCGACGCGA CCTTCGATGT CGTCACCGCC GCGCCGGAGG ACGCCGAAGA CGCTGTGGAA
TTCCGGCGCG GATGGTTCCT GGGCGACGGC ACCGGCGCGG GCAAGGGGCG TCAGGTCGCG
GGCATCATTC TCGACAATTG GCTCAAGGGT CGTCGCCGCG CAGTCTGGAT CTCGGTATCG
GACCGGCTGC TTGAAGATGC GCAGCGCGAC TGGTCGGCGC TTGGGCAGGA GCGGCTCCTG
GTGACGCCGC TCTCGCGCTT CCGCCAAGGC AGCGACATTC GGCTCGAGGA GGGCGTGCTA
TTTACGACCT ACGCCACACT CCGCTCGCAG GAACGCGGCG GCAAGAAATC ACGGGTCGAG
CAGATTGTCG AATGGCTGGG GCCGGACTTC GACGGCGTGA TCGTGTTCGA TGAAGCGCAC
GCCATGGCCA ATGCCGCTGG CGGCAAGGGC GAGCGCGGGG ATGTCGCGCC CTCTCAGCAG
GGCCGTGCCG GCTTGCGGCT CCAGCATGCC CTGCCCGATG CCCGCATTGT CTATGTTTCG
GCGACCGGCG CGACGACGGT GCAGAACCTT GCTTATGCCC AGCGCCTTGG CCTGTGGGGT
GGCGAGGATT TCCCCTTCGC GACCCGCGGC GAATTCGTCA GCGCGATCGA GAACGGCGGG
GTCGCGGCGA TGGAGGTTCT GGCCCGCGAT CTGAAGGCCC TCGGCCTCTA TGCCGCCCGC
TCGCTATCCT TCAATGGCGT CGAATATGAG ATGCTCGAAC ACAAGCTCAC GACCGAGCAG
GTTCGCATCT ATGACAGTTT CGCGTCGGCG TTCGAGGTGA TCCACAACAA CCTCGACGAC
GCGCTCGAAG CCGCCGGCGT CACCAGTGCG AGCCACGGCA CCTTGAACCG CCAGGCCAAG
GCGGCCGCGA AATCCGCCTA TCAGGGAATG CTCCAGCGCT TCTTCAACCA TCTCATCACC
AGCATGCAAA CGCCCAGCGT CATCGCCAGC ATCGAGCGTG ATCTGGAAGC AGGCCATGCG
GCCGTGGTGC AGATCGTCTC GACCGGCGAG GCCTTGCAGG AACGCCGCCT CGCCGAAATC
CCGGCCGATG AATGGAATGA CGTCTCGGTG GACATCACAC CGCGCGACGG CGTTCTGTCT
TACCTCCAGC ACAGCTTCCC GGTGCAGCTC TACGAGCCGT TCACCGATAG GGATGGCAAT
CTCTCGTCCC GGCCGGTCCA TGACGAGGAC GGCAACCCGG TCGTCAATCG CGAGGCCCTG
CGTCGCCGCG ACGCGATGAT CGAACGGCTC GCCGCGCACC CGCCCGTTCC CGGCGCGCTC
GACCAGATCG TCCAGCATTT CGGGACGGAC ATGGTGGCCG AAGTCACCGG GCGTTCACGC
CGCGTCGTTC CCCGGCACAA TGAGGACGGC TCGGTCCGCT TTGCCGTCGA GAACCGTCCC
GCGTCGGCAG CGCTGCACGA GACCGACGCC TTTCAGAATG ACGCCAAGTG CATCCTCGTC
TTCTCCGAAG CCGGTGGAAC GGGCCGATCC TATCATGCCG ATCTTGGCGC CGCGAACCAG
CGCCGCCGCG TCCATTACCT GCTCGAAGCG GGCTGGAAAG CCGACGCCGC GATCCAGGGG
TTCGGCCGCA CCAACCGCAC CAATCAGAAG CAGCCGCCGC TGTTTCGGCC GGTATCGACC
GATGTGAAGG CGCAGAAGCG CTTCATCTCG ACCATCGCCC GGCGCCTCGA TTCTCTGGGC
GCGATCACCC GCGGCCAGCG CCAGACCGGC GGGCAGAACA TGTTCCGGCC CGAGGACAAT
TTCGAAAGCT GGTATGCCCG CGATGCGCTG CGCCAGCTCT ATATCCTTCT CGCGCGCGGC
AAGGTCGAAG GCTGTTCGCT CGCCCGCTTC GAAGCGGCGA CCGGCCTGTC GCTTCTCGAC
AGCGACGGCG GCCTCAAGGA CGAGCTGCCG GGGATCAACA CCTTCCTCAA CCGCATGCTC
GCGCTCACGG TTGCGATGCA GAACCTTCTG TTCGAGGCGT TCGAGGGCCT GCTTGTCGCC
CGGATCGACC AGGCGCGGGC ATCGGGCAGC TATGAAATCG GGCTGGAGAC CCTGCAGGCC
GAAAGCTTCC GCATTGTCGG CCGCATGCCG ATCTACACCC ATCCGGGCAC GGGCGCGCAG
ACGCAGCTTC TGACCATCGA GCGCAAGGAC CGGTTGACGC CGCTGTCGCT CGAGGATGCG
CTGGCCATGG TCGATGGCAA AGGCGCGAAA CTGCTGGTCA ACAGCAAGAC CGGCCGCGGC
GCCGTCCAGC GCCGGGCGCG CAGCGTGACC GATGACGATG GCGCGGTTCA TCCGCGCCTG
CGCTTGGTCT GGCCGCTGAC CGATAGCATC GTTCCGGCGG AAACGCTGCT GGCGAGCCAG
TGGGACGAGG TAGGCCGCGA AACGTTCAGC GCGGCGTGGA AGGCGGAACT GGCAGGACTG
CCGACGCACG AGACTTCGAC GCTGCACATG GTTTCCGGCC TGCTGCTGCC GATATGGAAG
CGACTGCCCG ACGAGTCGAC GCGCGTTTAT CGGCTCCAGA GCGATGATGG CGAGCGTGTC
ATCGGTCGCC GCGTATCTCC GGCTTGGGCG GCCAGCGTCG CCAATGACGA TGGTCCGGTA
CGGCTCTCCG GCGAGGAAGC GCTTTCGATG CTCATGACTG GCGAAGCCGT GCTGCATCTG
GCGCAGGAGC AGAAGCTCCA GCGTGTCCGT GCCATGCACC ACTGGCGGAT CGAGATCACC
GGGTTCAATG ATCTGGGTGT CGAGCGTCTC AAGGCCATGG GCTTGATTTC GGAGATCGTC
TCGTGGAAAC TCAGGCTCTA CGTGCCGGCA GGGGCTGTCG GCGCCGATGT GCTGGACCGG
CTGCTCGAGC GATATCCGAT CGAACGGCTC TCCATGCGCA AGGCCGCCTG A
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| Protein sequence | MTGAFGASDS EGAWDWKSAY DACEAAEILF LRRYGQAIVG RAAPSALALI ERIAALMPTH
TRRSESSQAL QQFSTPPGLA FVASVAASIS PGDQVLEPSA GTGMLAVHGL LARARLTLNE
LGETRAELLR LLFPDVPVSG HDAASIDDRL PSDVRPSVVL MNPPFSAVAH VERTMKDAAL
RHIASALARL EPGGRLVAIT GASCAPDAPA WRDAFARLQE TGRIVFTAAI DGRVYAKHGT
KIETRLTVID KLPAEDLCIF PPSAGVAPDT ATLLGWVQAQ VPPRAPTTPS PVAALPVTAS
ASPVRTNTRT VAAAPSPSAP EQEAVELVYD IVDWTPPAER LGDSIYEPYA LQSIAIPSAS
AHPTPLVQSA AMASVAPPKP SYRPHLPPQL VTLGILSDAQ LESVIYAGEA HSGHLSGAWK
VDATFDVVTA APEDAEDAVE FRRGWFLGDG TGAGKGRQVA GIILDNWLKG RRRAVWISVS
DRLLEDAQRD WSALGQERLL VTPLSRFRQG SDIRLEEGVL FTTYATLRSQ ERGGKKSRVE
QIVEWLGPDF DGVIVFDEAH AMANAAGGKG ERGDVAPSQQ GRAGLRLQHA LPDARIVYVS
ATGATTVQNL AYAQRLGLWG GEDFPFATRG EFVSAIENGG VAAMEVLARD LKALGLYAAR
SLSFNGVEYE MLEHKLTTEQ VRIYDSFASA FEVIHNNLDD ALEAAGVTSA SHGTLNRQAK
AAAKSAYQGM LQRFFNHLIT SMQTPSVIAS IERDLEAGHA AVVQIVSTGE ALQERRLAEI
PADEWNDVSV DITPRDGVLS YLQHSFPVQL YEPFTDRDGN LSSRPVHDED GNPVVNREAL
RRRDAMIERL AAHPPVPGAL DQIVQHFGTD MVAEVTGRSR RVVPRHNEDG SVRFAVENRP
ASAALHETDA FQNDAKCILV FSEAGGTGRS YHADLGAANQ RRRVHYLLEA GWKADAAIQG
FGRTNRTNQK QPPLFRPVST DVKAQKRFIS TIARRLDSLG AITRGQRQTG GQNMFRPEDN
FESWYARDAL RQLYILLARG KVEGCSLARF EAATGLSLLD SDGGLKDELP GINTFLNRML
ALTVAMQNLL FEAFEGLLVA RIDQARASGS YEIGLETLQA ESFRIVGRMP IYTHPGTGAQ
TQLLTIERKD RLTPLSLEDA LAMVDGKGAK LLVNSKTGRG AVQRRARSVT DDDGAVHPRL
RLVWPLTDSI VPAETLLASQ WDEVGRETFS AAWKAELAGL PTHETSTLHM VSGLLLPIWK
RLPDESTRVY RLQSDDGERV IGRRVSPAWA ASVANDDGPV RLSGEEALSM LMTGEAVLHL
AQEQKLQRVR AMHHWRIEIT GFNDLGVERL KAMGLISEIV SWKLRLYVPA GAVGADVLDR
LLERYPIERL SMRKAA
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