| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2618 |
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| Symbol | |
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| ID | 4081671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2758284 |
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| End bp | 2760347 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010995 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_617657 |
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| Protein GI | 103488096 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAA CCCGTATCCT CTGGGGCCAG GTCATCGCCG TCTTCGGCGT GACGCTGGCT
GGCATCTGGG CGGCGACCCA ATGGACTGCC CATGCACTCG CCTATCAGCC CGAGCTGGGT
GAGCCGTGGT TCTCGCTGGG GTCATGGCCG ATCTATCCGC CGCCTGCCTT TTTCTGGTGG
TGGTTCGCGT TCGACGCCTA TGCGCCGAAG ATCTTCGAGA CCGGTGCGCT CATCGCGGTG
TCGGGCGCGA TGGCCGGGAT CGTCATCGCG ATCGTCCTGT CGGTCTGGCG CGCAAAGGAA
GCGAAGAAAG CCGAAACCTA TGGTTCGGCG CGCTGGGCCA GCGAGCGCGA AGTGAAGCGG
GTGAAGATGC TCGGCGACGA CGGCGTCGTT CTTGGCCACT TCGCGCAGCG CTATCTGCGC
CACGATGGTC CCGAGCATGT CTTGTGTTTC GCACCGACCC GGTCGGGCAA GGGCGTAGGT
CTCGTCATAC CCTCGCTCCT GACCTGGCCG GGAAGCTGCA TCGTCCACGA CATCAAGGGC
GAGAACTGGC AGCTCACCTC AGGCTTCCGG TCACGCCATG GGCGCGTGTT GCTGTTCGAT
CCGACCAACC GGGCCAGCGC CGCCTATAAT CCGCTGCTCG AGGTCCGGAA GGGTGAGTGG
GAAGTGCGCG ACGTGCAGAA TGTCGCCGAC GTGCTGGTCG ATCCCGAAGG CAGCCTCGAG
AAGCGCAATC ATTGGGAAAA GACCAGCCAC GCGCTGCTGG TCGGCGCCAT CCTCCATGTT
CTCTATGCGG AGGAAGACAA GACGCTGGCC GGCGTCGCCG CCTTCCTCTC CGATCCGCGT
CGCCCGATCG AGACCACGCT GCGGGCGATG ATGACCACGC CCCATCTGGG CGAGGCCGGG
GTGCATCCTG TCGTCGCCAG CGCCGCGCGC GAGCTGCTCA ACAAGTCGGA GAACGAACGC
TCGGGCGTGC TGTCCACCGC CATGTCGTTC CTCGGCCTCT ATCGCGATCC GATCGTGGCG
AGAGTGACGC GGGCCTGCGA CTGGCGCATC GCCGATCTGG TCGATGGGCC GGCACCGGTC
TCGCTCTATC TCGTCGTGCC GCCTTCAGAC ATCAGCCGCA CCAAGCCGCT CATCCGCCTG
ATCCTCAACC AGGTCGGCCG GCGTCTGACC GAGGAACTCA ATCCCAAAGG CCGTCCGCAC
CGGCTGCTGC TGATGCTCGA CGAGTTTCCG GCGCTCGGGC GGCTCGACTT CTTTGAAAGC
GCGCTCGCCT TCATGGCGGG CTACGGGATC AAGGCCTTCC TCATCGCCCA GAGCCTCAAC
CAGATCGAGA AGGCCTATGG GCAGAACAAT GCGATCCTCG ACAATTGCCA TGTCCGCGTC
GCCTTCGCGA CCAATGACGA GCGCACCGCC AAGCGGATCT CGGATGCGCT CGGCACCGCC
ACTGAAATGC GCGCGATGAA AAACTATGCC GGGCACAGGC TCTCGCCCTG GCTCGGACAT
TTGATGGTCT CACGAACCGA GACGGCGCGA CCCTTGCTCA CGCCTGGCGA GATCATACAG
CTGTCCCCGG AGGAGGAGAT TGTCATGGTG GGCGGCGTAC CGCCAATCCG GGCTATGAAG
GCACGCTACT TCACCGATCC GCGCTTTACC GTGCGGTTGC TGCCGCCACC GACACCCAAA
CCACTCGATC CGAAGCGGCG GCCCAAGGAT GACTGGTCCA CTCTCATACC GGTGAATGCG
CCGTCAGCCC CACCCTCCAA TCTTCCCGCG GCTGATGACG GGGGCGGGAA GGCGGAAGCC
GATGATGCGG AGCCGCAGGG CATCCGGGAA GGCGATCAGG CTGACGCTTC TACCGACGCA
GCCAATGCTG GCATCCGCCG CGAGCCCGAT CTTGGCGAGC ATGAGGAAAT CGTTCCTCCG
GCGAAGGAAA TGTCTGGGCA AGAAACGCCC GATGAGGACA ATCAGGATGA GGATTCCGCA
CGGGCGAAAC GCGAGGCGGA GCGGACCATG CGCCGCAATG CCCGTAACGC GTCGCTCGAC
CCGGATGACG GCATCGTGCT GTGA
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| Protein sequence | MNATRILWGQ VIAVFGVTLA GIWAATQWTA HALAYQPELG EPWFSLGSWP IYPPPAFFWW
WFAFDAYAPK IFETGALIAV SGAMAGIVIA IVLSVWRAKE AKKAETYGSA RWASEREVKR
VKMLGDDGVV LGHFAQRYLR HDGPEHVLCF APTRSGKGVG LVIPSLLTWP GSCIVHDIKG
ENWQLTSGFR SRHGRVLLFD PTNRASAAYN PLLEVRKGEW EVRDVQNVAD VLVDPEGSLE
KRNHWEKTSH ALLVGAILHV LYAEEDKTLA GVAAFLSDPR RPIETTLRAM MTTPHLGEAG
VHPVVASAAR ELLNKSENER SGVLSTAMSF LGLYRDPIVA RVTRACDWRI ADLVDGPAPV
SLYLVVPPSD ISRTKPLIRL ILNQVGRRLT EELNPKGRPH RLLLMLDEFP ALGRLDFFES
ALAFMAGYGI KAFLIAQSLN QIEKAYGQNN AILDNCHVRV AFATNDERTA KRISDALGTA
TEMRAMKNYA GHRLSPWLGH LMVSRTETAR PLLTPGEIIQ LSPEEEIVMV GGVPPIRAMK
ARYFTDPRFT VRLLPPPTPK PLDPKRRPKD DWSTLIPVNA PSAPPSNLPA ADDGGGKAEA
DDAEPQGIRE GDQADASTDA ANAGIRREPD LGEHEEIVPP AKEMSGQETP DEDNQDEDSA
RAKREAERTM RRNARNASLD PDDGIVL
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