Gene Sala_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2509 
Symbol 
ID4081620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2646202 
End bp2646657 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content64% 
IMG OID638010887 
ProductMerR family transcriptional regulator 
Protein accessionYP_617549 
Protein GI103487988 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02051] Hg(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.591979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGGA AAAATCTGCA GGACACAGCG CCCCGGCTCC CCATCGGAGC ACTGTCGCGG 
CGCACCGGAT GCAACATCGA GACGATCCGC TATTATGAGA AAATTGGCCT GCTCTCCGCG
CCTGCGCGCA GCGACGGCGG TCACCGGCTC TATGGCTATG GTCATCTCAT GCGGCTCGGC
TTTGTGCGGC GCGCGCGGGA ACTGGGCTTC ACGCTGGACG AGATCCGCGC GCTGCTTCGG
CTGGCCGAGG ACCGCGATCG CCCATGCACC GAAGCGCGCG AGGTCGCCGT GGTCCATCTG
ACCGACATTC GTACCAAGAT CGCGGATCTT CAGGCCATGG AGTCGGTGCT TGCCGAAACC
GTCGTGCGAT GCGCGGATGG CAAGACCCCG GAATGCCCGC TGCTGGAAAC GCTATTCGGT
TCGATCGATC CGTCTGCCCG GCCTCCTGCC GGCTAG
 
Protein sequence
MDRKNLQDTA PRLPIGALSR RTGCNIETIR YYEKIGLLSA PARSDGGHRL YGYGHLMRLG 
FVRRARELGF TLDEIRALLR LAEDRDRPCT EAREVAVVHL TDIRTKIADL QAMESVLAET
VVRCADGKTP ECPLLETLFG SIDPSARPPA G