Gene Sala_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2429 
Symbol 
ID4081135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2565762 
End bp2568083 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content66% 
IMG OID638010808 
Productcopper-translocating P-type ATPase 
Protein accessionYP_617470 
Protein GI103487909 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC ATCAGGGCGC AGAAAAAGGC AGCGGGAGCA CGACCGATCC CGTCTGCGGC 
ATGACGGTCG ATCCGGCCAC CACACCTCAC ACCGCGACGC ATAGCGGCAA GCATCACTAT
TTCTGCAGCG CAGGCTGCCT CGCCAAATTC GAGGCCGATC CCGATCTTTA TGCCGCAAAA
AGCGAGCCGG CCGCAGCCGA TGCACCCGAA GGCGCCATCT GGACCTGCCC GATGCATCCC
GAAATCCAGC GCGCCGGCCC CGGAAGCTGC CCGATCTGCG GCATGGCACT CGAGCCCGTC
ATGCCGACAG CATCGGACGG CCCCAGCGAA GAATATCGCG ATATGCGGCG GCGCTTCTGG
ATCGGGCTCC TTCTCGCCCT TCCGGTGGTT GCGCTCGAAA TGGGCGGCCA TCTGACGGGC
CTCCACCAAT ATGTCGGCCG CCAGACGAAC AACTGGATCC AGATGCTGCT CGCGACCCCC
GTCGTGCTAT GGGCTGGCTG GCCCTTCTTC GAGCGCGCCT GGCTCTCGAT CCGCAACAAG
AGCCTCAACA TGTTCACCCT CATAGCGATG GGGACGGGCG TTGCCTGGGG CTACAGCATG
ATGGCGGCGA TTCTCCCGCA AATCTTCCCG GCAGCCTTCC GCGCCGCCGA TGGTTCGGTC
GCGGTCTATT TCGAGGCCGC CGCAGTCATC ACGGTCCTGG TGCTACTCGG GCAGGTGCTC
GAACTCAGGG CCCGCGAAAC GACGAGCGGC GCGATCCGCG CGCTCCTTGA CCTGACACCG
AAGCTCGCCC GGCGCGTCCG CAGCGATGGA AGCGACGAGG AGGTAGCGCT CGAGGAAGTC
GCGGTCGGCG ACATGCTGCG CATCCGTCCG GGCGAAAAAG TCCCCGTCGA TGGCATCGTC
GTAGAAGGCC GCGGCACAGT CGACGAATCG ATGGTTACGG GCGAATCGAT GCCGGTCACC
AAGGCGGCCG GCGCGGCGCT GATCGGCGGG ACGATCAACC AGACGGGCGG CCTGCTCATG
CGCAGCGAGA AGGTCGGGCG CGACACGATG CTCGCGCGGA TCGTACAAAT GGTCGCCGAC
GCGCAGCGCA GCCGGGCGCC GATCCAGCGT CTCGCCGATA CCGTTTCGGG CTGGTTCGTG
CCCGGCGTCA TCGTCGTCGC CATCGTCGCT TTCATTGTCT GGTCGCTTCT CGGCCCCGCG
CCCGCCATGG CCTACGGCCT TATCGCCGCC GTCTCGGTGC TCATCATCGC CTGCCCCTGC
GCGCTCGGCC TCGCGACGCC GATGTCGATC ATGGTCGGCG TGGGGCGCGG CGCCGAAGTT
GGCGTGCTGA TCAAAAATGC CGAGGCGCTT GAGCGGATGG AGAAGGTCGA CACGCTCGTC
GTCGATAAGA CCGGGACGCT GACAGAAGGC AGACCCTCGG TCGTCGCCAT CGAAGTCGCC
GAAGGGTTCG AGGAAAACGA CCTCCTCCGG ATTGCCGCGA GCCTTGAGCG CAGCAGCGAA
CATCCATTGG CCGCCGCAAT CGTCAAAGCG GCGGAAGACC GCGCCCTCGC GCTCGTCGAG
CCATCGGGAG TCGACCAGCC GGTCGGCAAG GGCATCGTCG GGGTCGTCGA CGACAAGGCG
ATCGTCCTCG GCAATGCGAA CTTTCTCGAA GAATATGACG TCGATCTGGG CGCACTCGCC
GAGGCGGCTG ACCGGCTTCG TACAGACGGT GCAACGGCGA TCTACATCGC GGTCAGCGGC
AAGGCGGCCG GCGTCATCGC CATCGCCGAT CCGGTCAAGG AGACGACGGG CGACGCGCTC
GCGGCGCTGC GCGAGGCCGG AATCAAGGTC ATCATGCTCA CCGGCGACAA TCGCGTCACC
GCCGAGGCGA TCGCGCGGCG CCTCGGCATC GACGACGTTG AGGCCGACGT CCTCCCCGAC
CAGAAGAGTG CGGTCGTGCA GCGGCTGCGC GAAGAGGGCC GGATCGTCGC GATGGCCGGC
GACGGGGTCA ACGACGCCCC CGCGCTCGCC GCCGCTGACG TCGGCATCGC GATGGGCTCG
GGAACCGATG TCGCCATCGA AAGCGCGGGA GTGACGCTGC TGCGCGGCGA CCTTCTGGGC
ATCGTGCGGG CGCGGCATCT CAGCCATGCG ACGATGGCGA ACATCCGCCA GAATCTCTTC
TTCGCTTTCG CCTATAATGT CGCCGGGATT CCGGTCGCTG CGGGCGTGCT CTATCCGGTC
TTCGGACTAT TGCTCTCGCC GGTCATTGCC GCCGCTGCGA TGGCACTCTC GTCCGTCAGC
GTCATCGCCA ATTCTTTGCG GCTGCGCTTT GCCAGAATCT GA
 
Protein sequence
MHDHQGAEKG SGSTTDPVCG MTVDPATTPH TATHSGKHHY FCSAGCLAKF EADPDLYAAK 
SEPAAADAPE GAIWTCPMHP EIQRAGPGSC PICGMALEPV MPTASDGPSE EYRDMRRRFW
IGLLLALPVV ALEMGGHLTG LHQYVGRQTN NWIQMLLATP VVLWAGWPFF ERAWLSIRNK
SLNMFTLIAM GTGVAWGYSM MAAILPQIFP AAFRAADGSV AVYFEAAAVI TVLVLLGQVL
ELRARETTSG AIRALLDLTP KLARRVRSDG SDEEVALEEV AVGDMLRIRP GEKVPVDGIV
VEGRGTVDES MVTGESMPVT KAAGAALIGG TINQTGGLLM RSEKVGRDTM LARIVQMVAD
AQRSRAPIQR LADTVSGWFV PGVIVVAIVA FIVWSLLGPA PAMAYGLIAA VSVLIIACPC
ALGLATPMSI MVGVGRGAEV GVLIKNAEAL ERMEKVDTLV VDKTGTLTEG RPSVVAIEVA
EGFEENDLLR IAASLERSSE HPLAAAIVKA AEDRALALVE PSGVDQPVGK GIVGVVDDKA
IVLGNANFLE EYDVDLGALA EAADRLRTDG ATAIYIAVSG KAAGVIAIAD PVKETTGDAL
AALREAGIKV IMLTGDNRVT AEAIARRLGI DDVEADVLPD QKSAVVQRLR EEGRIVAMAG
DGVNDAPALA AADVGIAMGS GTDVAIESAG VTLLRGDLLG IVRARHLSHA TMANIRQNLF
FAFAYNVAGI PVAAGVLYPV FGLLLSPVIA AAAMALSSVS VIANSLRLRF ARI