| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2360 |
|---|
| Symbol | |
|---|
| ID | 4080761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2486323 |
|---|
| End bp | 2486820 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638010740 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_617402 |
|---|
| Protein GI | 103487841 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.138466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACC CCGAAATCAC GCTGATCCTG GCGCGCGCGG CCAATGGCGT GATCGGCGCG
AAGGGCCGGA TGCCGTGGCA CCTGCCCGCT GACCTCCGCC GGTTCAAACA GCTCACCATG
GGCCGCCCGA TGATCATGGG GCGCAAGACC TTCGACAGCC TGCCCGCGGT GCTCGAAGGC
CGCCGCCACA TCGTCCTCAC GCGCGATGCC GACTGGCAGG AGGAAGGCGC CGAACCCGTC
GCAAGCGTCG AGGAAGCGCT GAAACGCGCC AATGCGCCGC ATGTGATGGT GATCGGCGGC
GCCGAAATCT ATGCGCTGTT CCTGCCGCTC GCCGACCGCA TCGAACTGAC CGAGGTGGGC
CTCGAACCCG CTGGCGATGC GGTGATCGAC TATCCCGATC CGGCGCTCTG GCGCGAGGTC
GCGCGGGTCG ACCATCGAGC GGGCGAGGCG GGGCGCCCGG CCTACAGCTT TGTCACGCTC
GCGCGACGGA ATGGCTAG
|
|---|
| Protein sequence | MNHPEITLIL ARAANGVIGA KGRMPWHLPA DLRRFKQLTM GRPMIMGRKT FDSLPAVLEG
RRHIVLTRDA DWQEEGAEPV ASVEEALKRA NAPHVMVIGG AEIYALFLPL ADRIELTEVG
LEPAGDAVID YPDPALWREV ARVDHRAGEA GRPAYSFVTL ARRNG
|
|---|
| |