| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2344 |
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| Symbol | |
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| ID | 4080591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2471222 |
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| End bp | 2471971 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010724 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_617386 |
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| Protein GI | 103487825 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.157339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCA ATAAGGATCG CCGTGGCCAT CGGGGACGCG GCAAGCGCGA TGATTTCGGC
AATTTCGACA GCTTCGAACC GGCCCCCTAT GGCGGCGACT CCTACGGCGG CGGGCGTGGC
GGTTTCGGTG ATCGTGACCG CGGCGGTTTC GCTGGCGGCG ACCGGGGCGG TGGCTTCGGC
GGCGGCGACC GTGGCGGCGG CTTCGGCGGT GGGCGTGGCG GCGGCATGCC GGCACAGGTC
GTCGGTGAAG GCCAGGGCAC GGTCAAGTTC TTCAACCCGT CCAAGGGTTT CGGCTTCGTC
GCCCGCGACG ACGGTGGCGA AGACGTCTTT GTCCATATCA GCGCGGTCGA ACAGGCGGGG
CTCCAGGGTC TCGCGTCGGG CCAGCCGCTC GCTTTCACGC TCGTCGAGCG CAACGGCAAG
GTGTCGGCAA TCGACCTCAA GATCGAGGGC GAACCGATGC CGGTCGAAGA GTTCGCCCCG
CGTCAGCGTG AGGATCGCCC GGGCGGCGCC CGCGGGCGGC GCCAGTTGAC CGGCGAACGC
ACGTCGGGCA CGGTGAAGTT CTTCAACACG ACCAAGGGCT TCGGCTTCAT CGCGCGCGAC
GATGGCCAGG CCGACGCCTT CGTCCACATC AGCGCGGTGC AGCGCGCGGG CATGGCGGGC
CTTGAAGAGG GCGACCGCGT CGCCTTCGAC ATCGAAGTCG ATGATCGCGG CAAGTTCGCC
GCGGTGAACC TGCAGCCGCA TCAGGACTGA
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| Protein sequence | MSFNKDRRGH RGRGKRDDFG NFDSFEPAPY GGDSYGGGRG GFGDRDRGGF AGGDRGGGFG
GGDRGGGFGG GRGGGMPAQV VGEGQGTVKF FNPSKGFGFV ARDDGGEDVF VHISAVEQAG
LQGLASGQPL AFTLVERNGK VSAIDLKIEG EPMPVEEFAP RQREDRPGGA RGRRQLTGER
TSGTVKFFNT TKGFGFIARD DGQADAFVHI SAVQRAGMAG LEEGDRVAFD IEVDDRGKFA
AVNLQPHQD
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