| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2258 |
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| Symbol | |
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| ID | 4080561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2371949 |
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| End bp | 2376667 |
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| Gene Length | 4719 bp |
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| Protein Length | 1572 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010636 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_617300 |
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| Protein GI | 103487739 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.224376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA CTCTGTCCGA CACACCGGAA ACGGACACGC CGACCACCCC CGTCAAAATC
CCTGCAAAAA TCGCCGCTGC CTATCTGAGC GCGCTCGAGG GCAGCGCGCT CCCCGGCGAG
GGCGACGACC TGGACCGCGC CGCGCTTGCC GAGGCGAGCC GGTTCGCCGC GCGCGCGGCG
CTCGAGCGGG CCGCCGGGAG GCCGTCGCTG CTGCTCGAAC CGATCGCCGC CGAAGGGCCC
GACCGCCGGA TGCGGCTGGT CATCATCAAC GACGACATGC CTTTCCTTGT CGATTCGACA
TCGCAGGTCG TCGCGGCGCA GGGACTGGTT GTCCACCGTA TCCTCCACCC CGTCATCGCG
GTGAAGCGCG ACGCCGAGGG GCATTTGCAG GAAGCCGGCA CGGGCGACAT CCGCGAATCG
GTCATCTATA TCGAACTCGA ACGCGGCGAC GCGCGCGCCC GCCGCCGGTT GCTCGACGCG
ATCGAGGCGG CGCTGCGCGA TGTGCGCGCG GCGGTGCGCG ACTGGCGCGC GATGCGCGCC
GCGATGCTGG CCGATGCCGC GATGCGCCTC GAGGGCGAGG GCGCCGAACT GTTGCGCTGG
TTCGAGAGCG GATTCATGAC TCAGCTCGGT CACGAATGGC GCACGCGCGA CGGCCGGATG
CACGAACCGC TGGGGATCAG CGAGAGTGCG GATAGCGAGC TGCTGTCGCC CGCCGCGCTC
GCTGCCGCCT TTGACTGGTT CGACGGGCAG GTGCAATCGG GGAGCGCACC CGCGCCGTTG
CTCATCAAAT CGAACCGCCT GTCGGCGGTG CATCGCCGCG TGCTGCTCGA CCTCATCATC
GTCCCCGAAA TCAAGGGCAA GACGGTCGAG CGCCTGTCGA TCCACGCGGG GCTGTGGACG
AGCCAGGCGC TGTCGACGCC GCCCGCCAAG GTGCCCGTGC TGCGCGCGCA GCTCGATGCG
CTGATGACCA AATTCGGTTT CGATCCCGCG GGCCATGCCG GCAAGGCGCT CGCGCACGCG
CTGACTGCGC TGCCGCACGA TTTGCTGATC GCGTTCGACG CCGCATCGCT CGAGGAGCTG
GTGCTCACCT CGATGTCGAT CACCGACCGG CCGCGGCCGA AGCTGGTGAT GGTGCGCAGC
GCGCTCGGCC GCCATTTGTT CGCCTTTGTC TGGCTGCCGC GCGACGAGGT TTCGACGGGG
CGCCGCATCG CGGTCGAGGC GATGCTGGTG CGCGAGGCGA AAGCGGGCGT GATCGGCTGG
ACGATGGTGC TCGAGGACGG CGGCGCGGCG CTGCTGCGCT ACACGCTCGA TTTGCGCAGC
GGCGGGGTCG TTCCCGATAC CGGGGCGCTC AACGCACAGC TCGAACAGAT GGTGCGCGGC
TGGCAGCCCG AGGTCGAAGC GGCGCTGGCG CGGCGCGGCG ATCCGGGGCG TGCCGCGGCG
CTCGCGGCGC GTTTTGCGCC TGCTTTTCCG CCCAATTACC GCAATCTTTA CAACCCCGAA
GAGGCGGCGC GCGACATTCT GCGGCTGCGC GATCTCGATG CGGCGAACCC GCGCAGCGTC
CGGCTGGCGA AGAAAAGCCT CGATGGCGAC GACCGGCTGC GGCTCAAGGT CTATAGCGCG
GTCGGCCCGC TCGCGCTGTC CGACGTCGTC CCGGCGCTCG AACATTTCGG CTTCGAGGTG
CTCGAGGAAA TCCCGACCGC GCTCGGCCCG ACGCGCTCGC CGGGCGGCGA GGGTGACGAT
GACAGGCCGA TCGTGATTCA CGATTTCACG CTGCGCCTGC CCGTCAATGT CGACGAAATG
GCGCTGACGC CCTTTACCGC GACGATCGAG AAGGCGATTG CTGCAGTGCT CGACGGGCGC
GCCGAAAATG ATGCGTTCAA CCAGCTCGTG CTCACCAACC AGACCGATCC GGGCGCGATC
GTCTGGCTGC GCGCCTGGTT CCGTTACCTG CGGCAGGGCG GATCGGCATA CGGCATGGAC
ACGGTGGTGA GCGCGCTGCG CCACGCGCCG ACGCTGACCG CGGCGCTGAT CGAGCGGTTC
CGGGCGCTGC ACGACCCGAA GGTGCATGAC GCGGCGCGCG CCGAAGCGCT CGATGCCGAG
ATTCAGGCAG GTTTCGCAGG CATCAAGTCG ATCGACGAGG ACCGCATCCT GCGCCTTTTC
CATGCGGTGA TCGGCGCGAC GCTGCGCACC AACGCCTTTG CCCCCGCGGC GGCCGAGGCG
CTGGCGTTCA AGATCGACAG CGCGCAAATC CCCGGCCTGC CCAAGCCGCT GCCGTGGCGC
GAGGTCTGGG TCTATTCGCC CCGCGTCGAG GGGGTTCACC TGCGCGCCGG GCCGGTCGCG
CGCGGCGGGC TGCGCTGGTC CGACCGCCGC GACGATTTCC GCACCGAGAT ATTGGGGCTG
ATGAAGGCGC AGCGCGTGAA GAATGCCGTC ATCGTGCCGA CCGGCGCCAA GGGCGGCTTC
TATCCCAAGG CGCTGCCCGA CGTGTCGCTC GACCGCGACG CCTGGTTCGC CGAGGGCACC
GAATGCTACC GAATCTTCAT TCGCTCGCTG CTGTCGATCA CCGACAACCT CGTCGGCGGC
AAGGTGGTGC ATCCGGCTGA GGTCGTGATC CGCGACGGCG CCGATCCCTA TTTCGTCGTC
GCCGCCGACA AGGGCACGGC GACCTTTTCC GACGTCGCCA ATGGTCTCGC GATGGAGCGC
GGCTTCTGGC TCGGCGATGC CTTTGCGAGC GGCGGGTCGA AGGGATATGA CCACAAGGCG
ATGGGGATCA CCGCCAAAGG CGCGTGGATT TCGGTGCAGC GCCACTTCGC CGAAATGGGC
ATCGACGTGC AGAGCGACAC GATCCGCGTC GTCGGTTGCG GCGACATGTC GGGCGACGTG
TTCGGCAACG GGATGCTGCT CAGCAAGGCG ATCAAGCTTT GCGCCGCCTT CGACCACCGC
CACATCTTCC TCGACCCCGA TCCCGATCCG GCGAAGAGCT GGAAGGAGCG CGAGCGGATG
TTCGGGCTCC CGCGTTCGAG CTGGGACGAT TATGACAAGA AGCTGATCTC GAAGGGTGGC
GGGGTCTTTC CGCGCAGCCA GAAGAGCATC CCCCTCTCCC CCGAGGTGCA GGCATTGCTT
GGCCTGTCGG TGAGTGAAAT CGATCCAAGC TCGCTGATTT CGGCGATCCT GACGGCGCCG
GTCGACCTCT TGTGGTTCGG CGGCATCGGC ACCTATGTAA AGGCGGCAAG CCAGAATAAT
GCCGAGGTCG GCGACCCCGC GAACGACGTG CTGCGCGTCG ATGCCGAGGA TTTGCGGGTG
AAAGCGGTCG GCGAGGGCGC GAACCTGGGC GTCACGCAGG CGGCGCGCAT CGCCTTTTCG
GCGAAGGGTG GGCGGATCAA CACCGACTTC ATCGACAATA GCGCGGGCGT CGATTGTTCG
GATAACGAGG TCAATATCAA GATCGCATTG AACCGCGAGA TGGCCGAAGG GCGGCTGTCG
CAGGACGATC GCGACGCGCT TTTGCTCCGC ATGACCGACG ATGTCTCGGC GCTGGTGCTC
GAAGACAATC GCCTGCAGGC GCTCGCGCTG TCGATCGCCG AAAAGGGTGG ATCGGCGGCG
GTGCCGTCGC TGGTGCGGAT CATGGAGACG TTCGAGGGGT CGGGGCGCCT CGACCGCAAG
GTCGAAGGGC TCGCCGCGAA CGACGAACTG CTCCGCTGCG CCGCCGAAGG GCGCGGGCTG
ACGCGCCCCG AACTGGCGGT GCTGCTGTCG ACCGCAAAGC TGGCCTTGCA GGATGCGATC
GAGGCGAGCG ACCTGCCCGA CGATCCCGCG CTGGCGCGCG ACCTGGCCGC GGCCTTCCCC
CCGGAGATGC AGCGCGATTT CGCGGGCGCG ATCGCCGACC ACCAGCTGCG CCGCGAAATC
ATCGCGACCA AGGTGGCGAA CCGCATCGTC AACCGCATGG GCATCGTCCA CCCGTTCGAA
CTGGTCGAAG AGGAAGGCTG CGCGCTCGGT GATGTGGCGG CGGCCTTCGT CGCGGTCGAA
CGGCTGCTGG GAATGCCCGC GATCTGGAGC GAACTCGACG CGGCGAAGAT CGACGAGGGC
ATCCGCCTGT CGCTCTTTTC GCAGGCCGCG GCGGCGATGG CGTCGCAGAT GGCCGACCTG
CTCCGCGTGA CGCAATCGCT CTCGCGCCCC GGCCCGGTCG TCGCGCGGCT CGAACCCGGC
GTCGACCGTC TCAACGCCAG CGTCGACGGA CTGCTCAGCC CCTCGGTGCG GCGCCAGTGG
GAAATGCTGA CGCAGCAATT GCTCGACGCC GGCGCGCCCG AGGCGCTGAC CGCGGCGGTC
GTGCGATTGT TCAAGACCGA CGGCGCGATC GGCATCGTCG ATCTGGCCGA GCGCCGCGGC
GATGACGAGG TTGCGGTGAC GCACGCCTTC ACCCATCTGG GCGAGGCACT GGGGCTCGAC
TGGGCGCAGA CGCTCGCGGC GCATATGAGC CCCGCCGACC CGTGGGAGCG GCTGCTCGTC
AACAGCCTGG CGCGCGATTT CCAGCAGATG CGGCTGGCCT TCCTTGGCGG ATTGCCCAAG
GGCGACCTCG ACGCGGCGGT GACCAAATGG CTGGCCGACC ATGCGCCGCG CGTCGAACAG
TTCCGCGCCA CCGTCGACCG CGCGCGGATG ATCCCGAATC CCAACGGCGC GATGCTGTCG
CATATTGCGG GGCAGGCGCG CGGATTGCTG GCGCGGTAG
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| Protein sequence | MPKTLSDTPE TDTPTTPVKI PAKIAAAYLS ALEGSALPGE GDDLDRAALA EASRFAARAA
LERAAGRPSL LLEPIAAEGP DRRMRLVIIN DDMPFLVDST SQVVAAQGLV VHRILHPVIA
VKRDAEGHLQ EAGTGDIRES VIYIELERGD ARARRRLLDA IEAALRDVRA AVRDWRAMRA
AMLADAAMRL EGEGAELLRW FESGFMTQLG HEWRTRDGRM HEPLGISESA DSELLSPAAL
AAAFDWFDGQ VQSGSAPAPL LIKSNRLSAV HRRVLLDLII VPEIKGKTVE RLSIHAGLWT
SQALSTPPAK VPVLRAQLDA LMTKFGFDPA GHAGKALAHA LTALPHDLLI AFDAASLEEL
VLTSMSITDR PRPKLVMVRS ALGRHLFAFV WLPRDEVSTG RRIAVEAMLV REAKAGVIGW
TMVLEDGGAA LLRYTLDLRS GGVVPDTGAL NAQLEQMVRG WQPEVEAALA RRGDPGRAAA
LAARFAPAFP PNYRNLYNPE EAARDILRLR DLDAANPRSV RLAKKSLDGD DRLRLKVYSA
VGPLALSDVV PALEHFGFEV LEEIPTALGP TRSPGGEGDD DRPIVIHDFT LRLPVNVDEM
ALTPFTATIE KAIAAVLDGR AENDAFNQLV LTNQTDPGAI VWLRAWFRYL RQGGSAYGMD
TVVSALRHAP TLTAALIERF RALHDPKVHD AARAEALDAE IQAGFAGIKS IDEDRILRLF
HAVIGATLRT NAFAPAAAEA LAFKIDSAQI PGLPKPLPWR EVWVYSPRVE GVHLRAGPVA
RGGLRWSDRR DDFRTEILGL MKAQRVKNAV IVPTGAKGGF YPKALPDVSL DRDAWFAEGT
ECYRIFIRSL LSITDNLVGG KVVHPAEVVI RDGADPYFVV AADKGTATFS DVANGLAMER
GFWLGDAFAS GGSKGYDHKA MGITAKGAWI SVQRHFAEMG IDVQSDTIRV VGCGDMSGDV
FGNGMLLSKA IKLCAAFDHR HIFLDPDPDP AKSWKERERM FGLPRSSWDD YDKKLISKGG
GVFPRSQKSI PLSPEVQALL GLSVSEIDPS SLISAILTAP VDLLWFGGIG TYVKAASQNN
AEVGDPANDV LRVDAEDLRV KAVGEGANLG VTQAARIAFS AKGGRINTDF IDNSAGVDCS
DNEVNIKIAL NREMAEGRLS QDDRDALLLR MTDDVSALVL EDNRLQALAL SIAEKGGSAA
VPSLVRIMET FEGSGRLDRK VEGLAANDEL LRCAAEGRGL TRPELAVLLS TAKLALQDAI
EASDLPDDPA LARDLAAAFP PEMQRDFAGA IADHQLRREI IATKVANRIV NRMGIVHPFE
LVEEEGCALG DVAAAFVAVE RLLGMPAIWS ELDAAKIDEG IRLSLFSQAA AAMASQMADL
LRVTQSLSRP GPVVARLEPG VDRLNASVDG LLSPSVRRQW EMLTQQLLDA GAPEALTAAV
VRLFKTDGAI GIVDLAERRG DDEVAVTHAF THLGEALGLD WAQTLAAHMS PADPWERLLV
NSLARDFQQM RLAFLGGLPK GDLDAAVTKW LADHAPRVEQ FRATVDRARM IPNPNGAMLS
HIAGQARGLL AR
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