Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2230 |
Symbol | |
ID | 4080301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2343349 |
End bp | 2344311 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638010608 |
Product | malate dehydrogenase |
Protein accession | YP_617272 |
Protein GI | 103487711 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGCA AGAAGATCGC ATTGATCGGA GCCGGGAATA TCGGCGGAAC GCTGGCGCTG CTCGCCGCGC AGAAGGAACT CGGCGATGTC GTCCTGTTCG ACGTCGTCGA AGGCGTGCCG CAGGGCAAGG CGCTCGACCT GTCGCAGGTC GGCCCGATCG CGGGCTTTGA CGCAAAGATC AGCGGCTCGA ACGATTATGC CGACATCGCG GGTGCCGACG TCATCATCGT CACTGCGGGT GTCGCTCGCA AGCCGGGGAT GAGCCGCGAC GATCTGCTCG GCATCAACCT GAAGGTCATG AAGGCCGTGG GCGAGGGCAT CAAGGCCAAC GCCCCCGACG CCTTTGTCAT TTGCATCACC AATCCGCTGG ACGCGATGGT TTGGGCTCTC CGTGAGTTCT CGGGGCTGCC GCACAGCAAG GTCGTCGGCA TGGCCGGCGT GCTCGATTCG GCGCGCTTCA GCCACTTCAT CGCCGACGAA TTCGACGTGT CGGTGAAGGA TGTGAACACC TTCGTGCTCG GCGGTCATGG CGACACGATG GTTCCCGTCG TGCGTTATTC GACCGTCAAC GGCATCCCCG TTCCCGACCT CGTCAAGATG GGCCTGTCGA GCCAGGACAA GATCGACGCG ATCGTCAAGC GCACGCGCGG CGGCGGCGGC GAAATCGTCG CGCTGCTCGG CACCGGCTCG GCCTTCTATG CGCCCGCCGC CAGCGGCATC GCGATGGCCG AAGCCTATCT GGGCGACCAG AAGCGCATCC TGCCCTGCGC CGCCTATGTC GATGGTCAGT ATGGTGTTGA CGGCCTCTAT GTCGGCGTGC CGGTGATGAT CGGTGCGGGC GGGGTCGAGA AGATCGTCGA GATCGAACTC GACGACGCCG ACAAGGCGGG GCTTCAGGTT TCGGTCGACG CGGTCAAGGA ACTGTTGGAA GCTTGCAAGA AGCTCGATCC CAGCCTCGCG TAA
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Protein sequence | MGRKKIALIG AGNIGGTLAL LAAQKELGDV VLFDVVEGVP QGKALDLSQV GPIAGFDAKI SGSNDYADIA GADVIIVTAG VARKPGMSRD DLLGINLKVM KAVGEGIKAN APDAFVICIT NPLDAMVWAL REFSGLPHSK VVGMAGVLDS ARFSHFIADE FDVSVKDVNT FVLGGHGDTM VPVVRYSTVN GIPVPDLVKM GLSSQDKIDA IVKRTRGGGG EIVALLGTGS AFYAPAASGI AMAEAYLGDQ KRILPCAAYV DGQYGVDGLY VGVPVMIGAG GVEKIVEIEL DDADKAGLQV SVDAVKELLE ACKKLDPSLA
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