Gene Sala_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2224 
Symbol 
ID4080295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2335816 
End bp2336277 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID638010602 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_617266 
Protein GI103487705 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.124259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.831461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTC GATGCGCTTG CGGGGGCGTG AGCTATGAAC TGACGACGGC GCCGATGATC 
GTCCATTGCT GCCATTGTCG CCACTGCCAG CGCGAGACGG GAAGCGCCTT TGTCGTCAAC
GCGATGATCG AGAGCGAGCG GCTGCACGTC GAAGGAACCG TCGAGCTGGT GCTGACGCCA
TCCGAAAGCG GCCGCGGGCA GGAGATTGCC CGTTGCCCCG ATTGCCGCAT CGCGCTGTGG
AGCCATTATC CGAAAGCCGG GCGCCGATCG TCCTTCGTGC GCGTCGGCAC ACTCGACGAA
CCGGCCACCT GCCCGCCCGA CGTCCATATC TTTACGCGCA GCAAACAGCC GTGGGTTCAA
TTGCCCGCGG GCACGCCCAA TTTCGCCGAC ATCTACCCCT CGCGGGAAGA TGTCTGGAGC
GCCGCGGCGA TGGACCGGTG GCACGCGATG ATGGCATCGT AA
 
Protein sequence
MKGRCACGGV SYELTTAPMI VHCCHCRHCQ RETGSAFVVN AMIESERLHV EGTVELVLTP 
SESGRGQEIA RCPDCRIALW SHYPKAGRRS SFVRVGTLDE PATCPPDVHI FTRSKQPWVQ
LPAGTPNFAD IYPSREDVWS AAAMDRWHAM MAS