| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2187 |
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| Symbol | tgt |
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| ID | 4080221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2298168 |
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| End bp | 2299295 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010565 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_617229 |
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| Protein GI | 103487668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAA GATTCGCCTT TTCCATCTCC GCGACCGACG GCGCCGCGCG CGCAGGCGTG
ATCGCCATGC AGCGCGGCGA AATCCGCACC CCTGCCTTCA TGCCCGTCGG CACGGCGGCG
ACGGTGAAGG CGATGCGCCC CGCCGAGGTG CGCGCGGCGG GCGCCGACAT CATCCTCGGC
AACACCTATC ATCTGATGCT GCGGCCCACT GCCGAACGCA TGGCGCGGTT CGGCGGCCTT
CACAAGTTCA TGGGCTGGGA CCGCCCGATC CTGACCGACA GCGGTGGTTA TCAGGTGATG
AGCCTGTCGG CGCTGACCAA GCAGAGCGAA GAGGGCGTCG CGTTCAAGAG CCATCTCGAC
GGATCGCGCC ACATGCTCAC CCCCGAACGC TCGATGGAAA TCCAGCGGCT GCTCGGCAGC
GACATCGTGA TGGCGTTCGA CGAATGCCCG CCCGCCGGGG TGGACGCCCG GCGTGCCGAG
GCGAGCATGG AACGCTCGAT GCGCTGGGCG GCGCGCAGCC GCGCGGGCTT CGACGCGGGG
GAGGAGCATG CGGCGCGATC GGCGCTGTTC GGCATCCAGC AGGGCTCGCT CGACGAAAAA
TTGCGTGCGC GCTCGGCCGC GACGCTCATC GACATCGGCT TCGACGGCTA TGCGATCGGT
GGCCTGGCGG TGGGCGAGGG GCAGGCGGCG ATGTTCGGCG TGCTCGACTT TGCACCGGCG
CAGCTGCCCG CCGACCGTCC GCGCTATCTG ATGGGCGTTG GCAAGCCCGA CGATCTGGTC
GGCGCGGTCG CGCGCGGGGT CGACATGTTC GATTGCGTGC TGCCGACCCG GTCGGGCCGC
AACGGCCAGG CGTTCACGTG GGACGGTCCG CTCAACATCC GCAACGCCAA ATTCGCCGAC
GATCAGGAAC CGCTCGATGC GTCGTGCGGC TGTCCCGTCT GCACGATCTG GTCGCGCGGC
TATCTGCATC ACCTCGTCCG CGCCGGCGAA ATGCTCGGCG CGATGCTGAT GACCCAGCAT
AACATTCATT TTTATCAGGA TCTGATGCAG GCGATGCGCG ACGCGATCAC CACGGGGCGT
TTCGCGGCGT TCCGGTCCGA TTTTGCCGCG CGCTATCGTC GCGCCTGA
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| Protein sequence | MKPRFAFSIS ATDGAARAGV IAMQRGEIRT PAFMPVGTAA TVKAMRPAEV RAAGADIILG
NTYHLMLRPT AERMARFGGL HKFMGWDRPI LTDSGGYQVM SLSALTKQSE EGVAFKSHLD
GSRHMLTPER SMEIQRLLGS DIVMAFDECP PAGVDARRAE ASMERSMRWA ARSRAGFDAG
EEHAARSALF GIQQGSLDEK LRARSAATLI DIGFDGYAIG GLAVGEGQAA MFGVLDFAPA
QLPADRPRYL MGVGKPDDLV GAVARGVDMF DCVLPTRSGR NGQAFTWDGP LNIRNAKFAD
DQEPLDASCG CPVCTIWSRG YLHHLVRAGE MLGAMLMTQH NIHFYQDLMQ AMRDAITTGR
FAAFRSDFAA RYRRA
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