Gene Sala_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2184 
Symbol 
ID4080218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2293670 
End bp2294131 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID638010562 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_617226 
Protein GI103487665 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.755156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGA TCGGCGACCC CATCCCCGAT TTGAAACTTC CGGACGCCGA TGGCGCGGCG 
ATCGAGCTGG CCGCGATGAA AGGCGCGCCG CTGGTCGTCT ATTTCTATCC GAAGGCCGAC
ACGCCGGGCT GCACGACCGA GGCACAGGAT TTCACGCGGC TCGCGCCCGA TTTTGCGCAT
CTGGGCGCGC AGGTGCTCGC GGTCTCGCGC GACGCCCCGG CGAAGCTCTG CAAGTTCCGC
GACAAATATG GGCTGACCGT GCGCCTCGCT TCGGACGAGG ATGGCACGGC GTGCGAAGCC
TTTGGCACCT GGGTCGAAAA GCAGAATTAC GGCCGCACCT ATATGGGAAT CGAACGCTCG
ACCTTCCTGT TCGGCCGCGA CGGCAAGCTC GCGAAAGAGT GGCGCAAGGT GCGCGTGAAG
GGTCATGCCG ATGCGGTGCT GGAGGCGGCG AAGGCACTTT GA
 
Protein sequence
MIAIGDPIPD LKLPDADGAA IELAAMKGAP LVVYFYPKAD TPGCTTEAQD FTRLAPDFAH 
LGAQVLAVSR DAPAKLCKFR DKYGLTVRLA SDEDGTACEA FGTWVEKQNY GRTYMGIERS
TFLFGRDGKL AKEWRKVRVK GHADAVLEAA KAL