| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2172 |
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| Symbol | |
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| ID | 4080206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2281255 |
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| End bp | 2283231 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010550 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_617214 |
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| Protein GI | 103487653 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGAGC GGGATCATGA CAGCGAAACC GACGGGCGGC GCGAGCGGAT ACGCTTTGGC
CTGACGGTCG GCGTGGCGAC GATCCTCGCA GGGGTCGTCA CCGCGCTCGT GCTGCTGCTG
GCGCGCGCGA ACAATGACTA TGACCGCTCG CTCGCCTGGC AGGCGCAGAG CCTGGAGGTG
ATCGCGCAGA CGCGCTCGGT CGATGCCGCG CTCGCGCGCG CCGAAGCCGC GCTGGGGCGT
TTCGCCGTCG GCCTGCGGAA AGAGGATGGG CGCATCTATG AACAGCAATG GGGGCGCGCG
CGCCAGTTCC TCGCCCAGCT CGAACGCAAT GTCCGCGACA ACCCGGCGCA AGGCCGTCTT
GTCCAGCAAC TGACGCAGGA AATGAACAGC CGCGGCGCGC AGCTCGGCGA TGCCGCCCTC
AGCGCCAACT ACAACCAGAC GGTCGCCGCC ATATCGAAAT TTTATGCCGC GGGCCAGGGC
GACGGGCTGG CCAGGATCGA CAAGCTGCTG ACGCAGATCA TCACCAACGA GCGCGCCCTG
CTGCGCGAGC GCAACCGCGT CGCCGCCGCC GACCGCGCGA GTCTCAATCA GGCGATGCTG
CTCTTTTCGC TGCTCGGCGC GGCCGCGGCC GTGCTGGCGA TCGGCGCCAC CTTCTCGCTC
ATCCGCGCGC AGGGCGAACG GCGGCTGGCG CGGCGCGAAC AGGCAGCCGA AGCCGAACGC
GCGATGCAGC TCGAAGCCGC GGTCGAAGCG CGCACAGCCG AGCTTGAACA GGCGAATATC
GCGCTGCGCA GCGAAATGGC GGAGCGCGAG GCGGCTGAAG CGCAGTTACG GCAGGCGCAA
AAGATGGAGG CGGTCGGCCA GCTGACCGGC GGCATCGCGC ATGACTTCAA CAATATGCTC
GCGGTCGTCG TCGGCGGGCT CGAACTTGCC GAGCGCTGGC TGCCCGGTCA GCCCGAAAAG
GCGCAGCGCC ACCTTGCCAA TGCGCTCGAC GGCGCCAATC GCGCCGCCGA CCTGACGCGG
CGGCTGCTCA CCTTTGCGCG CGCCGAGCCC GCGCGCCCCG AAATGACCGC GATCGACGAA
TCGATCGGCA GCTTTGCGCC GCTGATCGAA CGCACGATCG GCGACCGCAT CGCGCTGACG
CTTGACCTCG ATGCCGCGGC GCTGGCGTGC TGGATCGACC GCCAGCAGTT CGAAAATGCG
CTGCTCAACC TGGCCGTCAA TGCCCGCGAC GCGATGGACG GACACGGATC GCTGACGATC
CGCACACGCG GCGCGGGCCA GGATGACGCG CGCACGCTGG CGGTCGAGGT GATCGACACC
GGCTGCGGCA TGACGGCAGA GGTGCTCGAT CGCGTCTTCG ACCCCTTTTA TACGACCAAG
CCCGCCGGCC AGGGCACCGG CCTCGGCATG AGCCAGGTCT TTGCCTTCTG CCGCCAGTCG
GGCGGCGAGG TGCAGATCGC ATCGACCGAG GGCGCAGGCA CGACCGTCGC GATGCTGTTG
CCGATCGCCA GCGCGCAACC CGGCACCGTC ACCGACGAGG CGCCCGGCCA CGTCGTGGCA
GCGACGACGC CCGCCGATGC GCTGACCATT CTGGTGGTAG AGGACGATGC GCGCGTGCTG
GTCGCGACGG TCGATGCCGT GCGCGAACTC GGCCATCGCG CGGTCGCGTG CAGCAACCCG
CTGGAGGCCG AGGCGCTGGT CGAGGCGCGG ATCAAGGAGG GACAGGCGCG TTTCGACCTG
ATCCTGACCG ACGTGCTGAT GCCTGACCTC ACCGGTCCCG AACTGGTCGC GCGACTGACG
CAGCGCTGGC CCGACCTGTC GGTGCTGTTC GTGACCGGCT ATGCCGGCGA CGCAAGCGAG
GGCGCGGCGT TCGGCGACCA TGACGTGCTG CGCAAGCCCT TCACCCTGTC GGCGCTCGAC
CAGGCGATCC GGCGCTGCGG CGAGGCGCGG TCGGAACGGC GCCGGCTGGC GAGTTGA
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| Protein sequence | MFERDHDSET DGRRERIRFG LTVGVATILA GVVTALVLLL ARANNDYDRS LAWQAQSLEV
IAQTRSVDAA LARAEAALGR FAVGLRKEDG RIYEQQWGRA RQFLAQLERN VRDNPAQGRL
VQQLTQEMNS RGAQLGDAAL SANYNQTVAA ISKFYAAGQG DGLARIDKLL TQIITNERAL
LRERNRVAAA DRASLNQAML LFSLLGAAAA VLAIGATFSL IRAQGERRLA RREQAAEAER
AMQLEAAVEA RTAELEQANI ALRSEMAERE AAEAQLRQAQ KMEAVGQLTG GIAHDFNNML
AVVVGGLELA ERWLPGQPEK AQRHLANALD GANRAADLTR RLLTFARAEP ARPEMTAIDE
SIGSFAPLIE RTIGDRIALT LDLDAAALAC WIDRQQFENA LLNLAVNARD AMDGHGSLTI
RTRGAGQDDA RTLAVEVIDT GCGMTAEVLD RVFDPFYTTK PAGQGTGLGM SQVFAFCRQS
GGEVQIASTE GAGTTVAMLL PIASAQPGTV TDEAPGHVVA ATTPADALTI LVVEDDARVL
VATVDAVREL GHRAVACSNP LEAEALVEAR IKEGQARFDL ILTDVLMPDL TGPELVARLT
QRWPDLSVLF VTGYAGDASE GAAFGDHDVL RKPFTLSALD QAIRRCGEAR SERRRLAS
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