Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2156 |
Symbol | |
ID | 4080190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2266655 |
End bp | 2267974 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010534 |
Product | recombination factor protein RarA |
Protein accession | YP_617198 |
Protein GI | 103487637 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.562236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCG ATCTCTTCGG TGAGGAAACA CCGACCGCGC GGCAGGACGC GGCGACCGGC GCCGCGCCGC TCGCTGAGCG GCTGCGGCCG CGCTCGCTGG CTGAGGTCGT CGGACAGGAG CATCTGACGG GCACCGACGG CGCGATCGGG CGCATGGTCG CTGCGGGCCA ATTGTCGTCG ATCATCCTGT GGGGGCCGCC GGGCACGGGC AAGACGACCA TCGCGCGCCT TCTGGCCGAG GCGGTGAAGA TGCGTTTCGC CGCGCTGTCG GCAGTTTTTT CGGGCGTCGC CGATTTGCGC CAGGCCTTTG CCGATGCCGA AAAAATGGCT GCGACGGGCA AACGGACCCT GCTCTTCGTC GACGAGATCC ATCGCTTCAA CCGCGCGCAA CAGGACGGCT TCCTGCCCTA TGTCGAGCGC GGCACCGTCG TGCTCGTCGG CGCGACGACG GAGAACCCCA GCTTTGCCCT GAACGCCGCG CTGCTCAGCC GCGCGCAGGT GCTGGTGCTG AACCGGCTTG GCGATGCTGC GCTCGAAACG CTGATCGACC GCGCCGAAGC CGAAACCGGC CGCGCGCTGC CGGTGACGAC CGAAGCGCGC GCCGCGCTCG TCGCCAGCGC CGACGGCGAC GGGCGGTTCC TGCTCAATCA GGTCGAAACG CTGTTTTCGG TGACGCTCGA TGCGCCGCTC GATCCGGCCG AACTTGCGCA ATTTCTCCAC CGCCGGATGC CCGTCTACGA CCGGGATCGC GACGGCCACT ATAATCTCAT TTCGGCGCTG CATAAGGCGG TGCGCGGCTC CGACCCGCAG GCGGCGCTCT ACTGGCTTGC GCGGATGCTC GTTGCGGGCG AGGAACCGCT TTATGTGCTC CGCCGCCTCA CCCGCCTTGC GAGCGAGGAC ATCGGCCTCG CCGACCCGCA GGCGCTGGTG CAGTGCCTCG CCGCAAAGGA CGCCTATCAG TTCCTCGGTT CGCCCGAAGG CGAGCTCGCG ATCGTGCAGG CGTGCCTCTA TCTCGCCACC GCGCCCAAAT CGAACGCCGC CTATGCCGCG CAGAAGGCGG CGTGGAGCGC GGCACGCGAG ACCGGCAGCC TCGCGCCGCC CGCGAACATC CTCAACGCCC CGACGAAGCT GATGAAGGAT CTGGGCTATG GCGCGGGCTA CAGCTATGAC CATGACGCTC CCGACGGTTT TTCGGGCGAC AATTATTGGC CTGACGGCAT GGCGCCGGGC GACTATTACC GCCCGGTCGA TCGCGGCTTT GAAAAACGGA TTGCCGAGCG CATGGCCTGG TGGGACGCGC AACGACGGTC AGGGCGGTGA
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Protein sequence | MAGDLFGEET PTARQDAATG AAPLAERLRP RSLAEVVGQE HLTGTDGAIG RMVAAGQLSS IILWGPPGTG KTTIARLLAE AVKMRFAALS AVFSGVADLR QAFADAEKMA ATGKRTLLFV DEIHRFNRAQ QDGFLPYVER GTVVLVGATT ENPSFALNAA LLSRAQVLVL NRLGDAALET LIDRAEAETG RALPVTTEAR AALVASADGD GRFLLNQVET LFSVTLDAPL DPAELAQFLH RRMPVYDRDR DGHYNLISAL HKAVRGSDPQ AALYWLARML VAGEEPLYVL RRLTRLASED IGLADPQALV QCLAAKDAYQ FLGSPEGELA IVQACLYLAT APKSNAAYAA QKAAWSAARE TGSLAPPANI LNAPTKLMKD LGYGAGYSYD HDAPDGFSGD NYWPDGMAPG DYYRPVDRGF EKRIAERMAW WDAQRRSGR
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