Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2143 |
Symbol | |
ID | 4080140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2250165 |
End bp | 2250983 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010521 |
Product | 3-demethylubiquinone-9 3-methyltransferase |
Protein accession | YP_617185 |
Protein GI | 103487624 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.136766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCG CCACGATCAA CCCGCACGAA GCCGCCCATT TCGGTGCGCT CGCCGCCGAC TGGTGGGATC CGCGCGGATC GTCGGCGATG CTGCACAGGC TGAACCCGGT GCGGCTGGCC TATATCCGCG AGCAGATCGA TGGCCATTGG CACGTCGATG CGCGTGAGCG CCATCCGCTC GCGGGCAAGC ACGTGCTCGA TGTCGGCTGC GGCGCCGGGC TGCTGTGCGA GCCGCTCGCG CGGATGGGCG CGAAGGTCAT CGGCATCGAT GCCGCGCCGG AAAATATCGC GGCGGCAAAG GATCATGCGG CGGGGCAGGG GCTGGCGATC AGCTATTTCG CCGGTGAGCT GGCTGACCTC CCGAATCCGT TCGTGTCGAG CGAAGTCGAG ACACTCTTGG GGAGCGCCGA CCTTCGGGGT GTCTCGACTT CGCTCGACAC GAACGGGGAG GGGAAGGGTC AGTTCGACCT CGTCACCTCG ATGGAGGTGA TCGAGCATGT CGTCGATCCT GCCGTCTTCG TCGCCGAACT CGCGGCGCGC CTCGCGCCCG GCGGGCTGAT GATCCTGTCG ACGCCGAACC GCACGATCGC CTCGAAACTG CTGCTCGTCG AGGCCGCCGA ACGGATCGGC GCGGTGCCGC GCGGGACGCA CGACTGGGAC CGGTTTCTAA AGCCGGAGGA GCTGACGAAA CTGCTCGAAG GCGCGGGGCT GGAGGTTATC GACCGCACCG GCCTGGCGCC GTCACCGGCG CGGGGCTTCA AGCTCGGCGG CAGCGAGGCG CTCAACTATC TGATGACCGC GCGCTGGCCG GATAGATAG
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Protein sequence | MTAATINPHE AAHFGALAAD WWDPRGSSAM LHRLNPVRLA YIREQIDGHW HVDARERHPL AGKHVLDVGC GAGLLCEPLA RMGAKVIGID AAPENIAAAK DHAAGQGLAI SYFAGELADL PNPFVSSEVE TLLGSADLRG VSTSLDTNGE GKGQFDLVTS MEVIEHVVDP AVFVAELAAR LAPGGLMILS TPNRTIASKL LLVEAAERIG AVPRGTHDWD RFLKPEELTK LLEGAGLEVI DRTGLAPSPA RGFKLGGSEA LNYLMTARWP DR
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