Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2087 |
Symbol | |
ID | 4080061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2192584 |
End bp | 2192916 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010462 |
Product | XRE family transcriptional regulator |
Protein accession | YP_617129 |
Protein GI | 103487568 |
COG category | [K] Transcription |
COG ID | [COG2944] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.5089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.765072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGGA CGGCCAAGGA TAAGGGCTAT CGCAGCGAGA TCGCGGGCGC GATCCATGAG ATGATCAGCG ACGCGCATGA CGCGGGCGTC GTGTCGCGCA CGACTTTGCG CAGCTTTGAC GAAGCGTGCC TTGCCCCGGC GCCGACGCTG GCGGGCGACG AAATCCGCGC GATCCGCGAG CGCGAGCATG TGTCGCAACC GGTGTTCGCC GCCTATCTCA ACGTCTCGCG CAATCTGGTG TCGGACTGGG AACGCGGCGT AAAGCGGCCG GGCGGCCCCG CCCTGCGGCT GCTCTCCATC ATCCAGCGCA AGGGATTGCA AGCCGTCGCA TGA
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Protein sequence | MTRTAKDKGY RSEIAGAIHE MISDAHDAGV VSRTTLRSFD EACLAPAPTL AGDEIRAIRE REHVSQPVFA AYLNVSRNLV SDWERGVKRP GGPALRLLSI IQRKGLQAVA
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