| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2083 |
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| Symbol | |
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| ID | 4080057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2188781 |
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| End bp | 2190370 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010458 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_617125 |
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| Protein GI | 103487564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.438087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.890804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCC GCTCCCTCCC CCGCCGTCCT GCTGCCGCGG CGCTCCCCGC TGACGATATG
ATCCCGCTCC ACGAACGCGT GCGCTACCGC GGCCTGCTCA CCGTCGCCGT CATGGGCGCG
TCGATCATGC AGATCCTCGA CACGACGATC GCCAATGTCG CCATCCCGCA CATGCAATCG
GCCTTGGGCG CGACGAGCGA AACGGTGACG TGGGTGCTCA CCAGCTATAT CCTCGCAAGC
GCGATCGCGA TGCCGATCAC CGGCTGGCTC GCCGACCGCA TCGGGCGGCG CGAGCTGTTC
CTTGCCGCGA TCGCGGGGTT CATCGTCGCG TCGATGGCGT GCGGCGCGGC GCAATCGCTC
GAACAGATGG TCGCCTTCCG CTTTTTGCAG GGTATTTTCG CGGCCTTCAT CGGCCCGCTG
TCGCAGTCGG TGATGCTCGA CATCAACCCG CCCGAGCGCC ATGCGCGCGC GATGTCGATC
TGGGGCATGG GGATCATGAT CGGACCCATT CTCGGCCCCG TGCTCGGCGG CTGGCTGACC
GAAAGCGCGA ACTGGCGCTG GGTCTTTTAC GTCAACCTGC CCGTCGGGCT GGTCACGCTC
GCGCTGATGT GGGCGCTGCT GCCCGCGATG CGCCGGACAA GCCGCAAGTT CGATCTCTTC
GGCTTTTCGA TGCTCGCGCT GGGGCTCGCC GCGCTGCAAC TGATGCTCGA CCGCGGCGCG
CATCTCGACT GGTTCGACAG CATCGAAATC TGGATCGAAC TCGGCGTCGC GACGGCCTGC
CTCTGGATGT TCTTCGTCCA TCTCTTCACC GCGCGCGCGC CGCTGTTCAG CCGCGCGATG
CTCGCCGACC GCAACCTCGT CACCGCGATG GGCTTCATGA TCGTCATCGG CATCGTGATG
TTCGCGTCGA TGGCGCTGCT GCCGCCGATG CTGCAAAATC TCTTCGGCTG GCCGGTGATC
GACACGGGGC TGGTGCTCGC GGTGCGCGGC GTCGGCATCC TCGCGAGCAT GTGGGTCGCG
GGGCAGTTGC TGGGCAAGGT CGACGCGCGC TGGCTCGTCG GCACCGGCCT TGCCATCGCC
GCCTATTCGC TGTGGCAGAT GAGCCACTGG TCGCTCGCCA TGGGGATGCA GCCGGTGATC
GTCAGCGGGC TGGTGCAGGG GCTGGGCATG GGGCTGATCT TCATTCCGCT CAACACCATG
GCCTTTGCAA CGATCGCGCC GCAGCACCGC ACCGACGGGT CGAGCCTGCT GAACCTGCTC
CGCAGCCTCG GCGCCTCGGT CGGCATTTCG GTGGTGACCA CCCTGCTCGG CATCAATATC
CAGACCAGCC ATCAGGATCT CGCCGCGCAT GTCACCAACA GCTCGGTCGC GCTCATCGAC
CCCTCGACCG CCGACCGCTT CGGCGTCGTC GGCGACACCG CGCTGGCGAT GGTCAACGCC
GAGATCAACC GGCAGGCGGC GATGGTCGCC TATATCGACG ATTTCTGGCT GATGATGTGG
GTGACTTTGC TTTCGGTCCC GCTCGTCCTC CTGCTCCGCC CGCCCAGGGC CGGCGCGCCC
AAGGCCTCGG CGGCCGACAT GGGGCATTGA
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| Protein sequence | MASRSLPRRP AAAALPADDM IPLHERVRYR GLLTVAVMGA SIMQILDTTI ANVAIPHMQS
ALGATSETVT WVLTSYILAS AIAMPITGWL ADRIGRRELF LAAIAGFIVA SMACGAAQSL
EQMVAFRFLQ GIFAAFIGPL SQSVMLDINP PERHARAMSI WGMGIMIGPI LGPVLGGWLT
ESANWRWVFY VNLPVGLVTL ALMWALLPAM RRTSRKFDLF GFSMLALGLA ALQLMLDRGA
HLDWFDSIEI WIELGVATAC LWMFFVHLFT ARAPLFSRAM LADRNLVTAM GFMIVIGIVM
FASMALLPPM LQNLFGWPVI DTGLVLAVRG VGILASMWVA GQLLGKVDAR WLVGTGLAIA
AYSLWQMSHW SLAMGMQPVI VSGLVQGLGM GLIFIPLNTM AFATIAPQHR TDGSSLLNLL
RSLGASVGIS VVTTLLGINI QTSHQDLAAH VTNSSVALID PSTADRFGVV GDTALAMVNA
EINRQAAMVA YIDDFWLMMW VTLLSVPLVL LLRPPRAGAP KASAADMGH
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