Gene Sala_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2067 
Symbol 
ID4080003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2176641 
End bp2177075 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content63% 
IMG OID638010441 
ProductMucR family transcriptional regulator 
Protein accessionYP_617109 
Protein GI103487548 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.587924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.315987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC AAGCCGACAC CAACGAAATG CTCGTTACGC TGACCGCCGA TATTGTTGCG 
GCGCACGTCA GCAACAACAG CGTCGCCATT TCCGATCTTT CGCTGCTCAT CAACAATGTC
TACGCGGCGC TTTCGGGCCT CGGCGGGGCG CCGGTGGTCG AGGAGAAGCC CGTGCCCGCG
GTATCGGTGC GCGCGTCGGT CAAGCCCGAC TATATCGTCT GCCTCGAGGA CGGCAAAAAG
CTGAAGATGC TCCGTCGCCA CCTGATGACG CATTATGGGA TGACCCCCGA CGATTATCGC
GCGAAATGGG GCCTGGCCGC CGACTATCCG ATGGTCGCGC CCAACTATGC CGAAAAGCGC
CGCGCGCTGG CGAAGGAAAT CGGCCTCGGC ACCAAGGGGC GCGGCGGCGG CCGTCGGCGC
AAGACCAAGG CGTAA
 
Protein sequence
MSEQADTNEM LVTLTADIVA AHVSNNSVAI SDLSLLINNV YAALSGLGGA PVVEEKPVPA 
VSVRASVKPD YIVCLEDGKK LKMLRRHLMT HYGMTPDDYR AKWGLAADYP MVAPNYAEKR
RALAKEIGLG TKGRGGGRRR KTKA