Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2022 |
Symbol | |
ID | 4079959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2132342 |
End bp | 2134015 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010398 |
Product | protein of unknown function DUF853, NPT hydrolase putative |
Protein accession | YP_617066 |
Protein GI | 103487505 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.27586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0150658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGG TTTGCAGATT GCTTGTGCGC CGACGCCGTT CTAACCGTTG CAGCGGGTTA TCCAGCGGAG GATGGCGAGT GAGCGAAGGC AGCGCGGCGA GCGAAATCTA TATCGGCCTC GGCGGCGGCG GGGCGCCCGA GGGGCCGCGG CAGTCGCTGG TGCTGAAGCG CGCGAACCGG CACGGGCTGA TCGCCGGCGC AACGGGGACC GGCAAGACGG TGACGTTGCA GGGGTTGGCC GAAGGCTTTT CGGCAGTGGG TGTGCCGGTC TTCGTCGCCG ACGTGAAAGG CGACCTTGCC GGCATGGCGA TGGCGGGAAG CCCGACCGCC AGGGTTCACG AGCCCTTTTC GAAGCGTGCC GCCGAAATCG GTGACACCGA CTGGGCCTAT CGCGACAATC CCGTGATCTT CTGGGACCTG TTCGGCGAAC AGGGGCATCC GGTGCGCACG ACGATCTCCG AAATGGGGCC GCTGCTGCTT GCGCGGCTGA TGGGGCTCAA CGAGACGCAG GAAGGGGTGC TCGCGATTGC GTTTAGGGTA GCTGACGAGC AGAATATGTT GCTGCTCGAC CTGGGCGATT TGCAGGCGAT GCTCGTCTGG TGCGCCGAAA ATGCCGATGA GCTGACAGCG AAATATGGCA ATGTCACCAA GGCGAGCGTC GGGGCGATCC AGCGGCAGCT GCTGACGCTC GAAAGCCAGG GCGGCGATCA TTTCTTCGGC GAACCCGCGC TCGACATTCA GGACATGATC CGTACCGACG AGAATGGCCG CGGCTATGTG AACATCCTTG CCGCCGACAG GCTGATGGCG AGCCCCAAGC TCTATGCGAC CTTTCTCCTC TGGCTGCTGA GCGAGATGTT CGAGACGCTG CCCGAGGTCG GCGATCCCGA CAAGCCGAAG CTGGTTTTCT TCTTCGACGA GGCGCATCTG CTGTTCGACG ATGCCCCGCC CGCGCTCACC GACAAGATTG AACAGGTCGT GCGCCTGATC CGCTCGAAAG GGGTCGGCGT CTATTTCGTC ACGCAAAACC CGATCGACAT TCCCGAGGCG GTCGCGGGTC AGCTGGGCAA TCGCGTCCAG CACGCGCTGC GCGCCTTTAC CCCGCGTGAT CAGAAGGCGG TGAAGGCCGC CGCGGACACC TTTCGCCCCA ATCCGAAGAT CGATGTGGCG CGTGAGATCA CCGAGCTGCG CGTTGGCGAG GCGCTGGTGT CGCTGCTGAT GCCCGATGGC GCCCCGTCGC CGGTCGAGCG CACATTGATC AAGCCGCCTT GCTCGCGCGC GGGGCCGCTC GATGCCAAGG AACGCGCGAT CATCCGGTCG ATCTCGCCGG TCGAGGGCAA ATATGACACG GCGGTCGACC GCGAAAGCGC CGAGGAACTG CTCGCCGTCA AGGCCGAGCA GGCGCAGGCG GCCGCGATCG AGGCGAAGGC GCAGGAGGAG GCCGACAAGG CGGCCGCGAT CGCGGCGAAG GAAGAGGCGA AGCGCAAGGC GGCCGAGGAG CGCGAGCGCA TCCGGCTGGA AAAAGCGGCG GCACGCGAGG CAGCGAAACC GAGCATGGCC GAAAAGATGG TGCAGTCGGC GGCGCGTTCG GCGGCGACGA GTCTCGGGCG CCAGGTTGCG GGCCGACTGG GCGGTCAGCT GATGCGCGGG ATTTTGGGAA GCCTGTTCAA ATAG
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Protein sequence | MARVCRLLVR RRRSNRCSGL SSGGWRVSEG SAASEIYIGL GGGGAPEGPR QSLVLKRANR HGLIAGATGT GKTVTLQGLA EGFSAVGVPV FVADVKGDLA GMAMAGSPTA RVHEPFSKRA AEIGDTDWAY RDNPVIFWDL FGEQGHPVRT TISEMGPLLL ARLMGLNETQ EGVLAIAFRV ADEQNMLLLD LGDLQAMLVW CAENADELTA KYGNVTKASV GAIQRQLLTL ESQGGDHFFG EPALDIQDMI RTDENGRGYV NILAADRLMA SPKLYATFLL WLLSEMFETL PEVGDPDKPK LVFFFDEAHL LFDDAPPALT DKIEQVVRLI RSKGVGVYFV TQNPIDIPEA VAGQLGNRVQ HALRAFTPRD QKAVKAAADT FRPNPKIDVA REITELRVGE ALVSLLMPDG APSPVERTLI KPPCSRAGPL DAKERAIIRS ISPVEGKYDT AVDRESAEEL LAVKAEQAQA AAIEAKAQEE ADKAAAIAAK EEAKRKAAEE RERIRLEKAA AREAAKPSMA EKMVQSAARS AATSLGRQVA GRLGGQLMRG ILGSLFK
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