Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2021 |
Symbol | |
ID | 4079958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2131015 |
End bp | 2132301 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638010397 |
Product | cytochrome P450 |
Protein accession | YP_617065 |
Protein GI | 103487504 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2124] Cytochrome P450 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00496503 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAAAAC CTATATTGCC CGGAGAGGTC GCCGCCGCGG TCGTCAATCC CGCCGCCTAT GGGGCGTGGA AGCCGCTTCA TGAACAGCTT GCCTGGGCGC GGGCGAACAT GCCGCTGGCG GTTGCGGAGA ATCCGAACCA CGATCCTTTC TGGCTCGTCA CGCGCCATGC CGACGTCATG GCGATCAGCC GCGATCCGCA ACGCTTTGCC AACGGCATCC GGCCGACGGT GCTGACCGAC CGCGCGGGGG AGGCGCTGGC GCGCGCGGCG ACGCCGGGGG GCGATGGCCA TCTGGTTCGC TCGCTCGTCC AGATGGATGC GCCCGATCAT ATGAAATACC GACTGCTGAC GCAGAGCTGG TTCATGCCCA GGAATCTGAA GACGATCGAG GACCGGATTC GGCAGATCGC GCGCGACACC GTTGAGCACA TGCTGGAGGC AGGGGGATCA TGCGATTTCG CGCGCGATGT GGCGGCGCAT TATCCGCTGC GCGTCATCAT GGATATATTG GGCGTGCCGC CCGAGGACGA ACCGCGGATG CTGATGCTGA CGCAGCAATT GTTCGGACCG ACCGATCCCG AACTCAACCG CAGCCGTGAA GCAATCACCA GTTCCGAACA GGCGATCGCG ATGCTGCATT ATGTCATCGC GGACTTCGAG GCGTATTTCG GGGCGCTGAC CGCCGACCGC CGCGCCAACC CGCGCGAGGA TATTGCGACG GTGATCGCCA ATGCCATGGT CGATGGCGAG CAGATTCCCG ACCGCGAACT CGCCGGCTAT TATATGATCA TCGCGACCGC GGGCCACGAC ACGACGAGCG CGTCCACCGC CGGGGCGATC ATGGAACTGG CCCGCAATCC CACGCTGTTT CAGCGGTTTC GCGATGCGGA GAGCGACAAG GCGGGGCTGA TCGAGGAAGC GATCCGCTGG ACGACGCCGG TGCAGCATTT CATGCGCAGT GCCCGGCAAG ATGTCGAAAT GGGCGGGCAG ACGATCCGCG AAGGCGACTG GCTGATGCTG AATTATGTTT CCGCAAACCG CGACGAGGGG GTCTTTGTCG ATCCGTTCAT GTTCGATCCT GACCGCGCGA AGAACCCGCA GATCGCCTTT GGTTTCGGCG CGCATGTCTG CCTGGGGCAG CATCTGGCGC GGCTGGAGAT GCGGATTTTG ATGGAGGAGT TACTGCCGCG GCTGACCAGC CTGGAGCTGG CGGGCGAGCC CGCGCGCGTC GAATCGGTGT TCGTCGGCGG GCTGAAGCGG CTGCCGATCC GGTTTGAAGC GGCGTAG
|
Protein sequence | MTKPILPGEV AAAVVNPAAY GAWKPLHEQL AWARANMPLA VAENPNHDPF WLVTRHADVM AISRDPQRFA NGIRPTVLTD RAGEALARAA TPGGDGHLVR SLVQMDAPDH MKYRLLTQSW FMPRNLKTIE DRIRQIARDT VEHMLEAGGS CDFARDVAAH YPLRVIMDIL GVPPEDEPRM LMLTQQLFGP TDPELNRSRE AITSSEQAIA MLHYVIADFE AYFGALTADR RANPREDIAT VIANAMVDGE QIPDRELAGY YMIIATAGHD TTSASTAGAI MELARNPTLF QRFRDAESDK AGLIEEAIRW TTPVQHFMRS ARQDVEMGGQ TIREGDWLML NYVSANRDEG VFVDPFMFDP DRAKNPQIAF GFGAHVCLGQ HLARLEMRIL MEELLPRLTS LELAGEPARV ESVFVGGLKR LPIRFEAA
|
| |