| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2006 |
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| Symbol | |
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| ID | 4079943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2115059 |
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| End bp | 2116153 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010382 |
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| Product | proline iminopeptidase |
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| Protein accession | YP_617050 |
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| Protein GI | 103487489 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.749517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00407135 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCATGG ATTTTTCGCG GCTTCAGGCG TCGAGCAAGA TCGGCGAGCA GTGGGTCTAT
CCGCAGCCCG CCTGCCTCAA TTTCGGGTGG CTGGAGGTCG ACCGCGATCC CGCGCACCGC
CTTTACTGGG AGGAATATGG CAATCCCGCG GGCGAGCCGG TGATGGTCCT GCACGGCGGC
CCCGGCGGCG CGTGCGCGCC GGTGATGGCG CGCTTTTTCG ATCCGAAGCG ATACCGGGTG
ATCCTGTTCG ACCAGCGCGG GTGCGGCAAG AGCGAGCCCA ATGTCGCGTC GGCCGGGCCG
GCGGTCGCGC TGGCCAAAAA CACCACCGCC GACCTGATCG GCGACATCGA GAAATTGCGC
GATCATCTGG CGATTGCGGG GCCGATGCAC GTCTTTGGCG GCAGCTGGGG CAGCACGCTG
GCCATGGCCT ATGCGATCCA GCATCCCGCG CACTGCGCCA GCCTGATCCT GCGCGGCATC
TTTCTGGGCG CGGCGGAGGA TCTGCTTTAC CTCTATCAGG GCAATGCCGC GACGTGGGGA
GACGACCCGT TCGCGCTGAC CGCGCCCGGC GCCTATATCA AATATCCCGA CCAATGGGCG
GCGCTGCTCT CGGTGCTGAG CGCCGACGAG CGGCGCGATG TCATGGCGTC GTACAAGGCG
ATTTTCGATA TGGTGCCGGC GAATGCGGCG GAGAAGGAGC GGCAGCTGAA CGCCGCGCTC
ACCTGGTCGC TATGGGAAGG GGTGATTTCC AACATGATCC CCGAGACGGC CGACACGGGC
AAGTTCGGCG AGGCCGATTT CGCGCTGTGC TTCGCGCAGA TCGAGGCGCA TTATTTCGCC
AACGACCTGT TCCTGCCCGC GGGCCATTTT TTCGACCATA TCGACATACT GGCGTCGATC
CCCATCCACA TCGTCCACGG CCGTTTCGAC GAAGTCTGCC CGCTGACACA GGCATCGCGG
CTGGTCGCCG CGCTGCGCGC CGCGGGGGCG GAGCCGGTGT CCTATGTCGT CACCAATGCG
GGGCACAGCG CGATGGAGCG CGAGAATGCG CTGGCGCTGA CGGCGGTGAT GGATGGGTTG
GGGAGGATTG TATAA
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| Protein sequence | MVMDFSRLQA SSKIGEQWVY PQPACLNFGW LEVDRDPAHR LYWEEYGNPA GEPVMVLHGG
PGGACAPVMA RFFDPKRYRV ILFDQRGCGK SEPNVASAGP AVALAKNTTA DLIGDIEKLR
DHLAIAGPMH VFGGSWGSTL AMAYAIQHPA HCASLILRGI FLGAAEDLLY LYQGNAATWG
DDPFALTAPG AYIKYPDQWA ALLSVLSADE RRDVMASYKA IFDMVPANAA EKERQLNAAL
TWSLWEGVIS NMIPETADTG KFGEADFALC FAQIEAHYFA NDLFLPAGHF FDHIDILASI
PIHIVHGRFD EVCPLTQASR LVAALRAAGA EPVSYVVTNA GHSAMERENA LALTAVMDGL
GRIV
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