Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1995 |
Symbol | |
ID | 4082160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2105225 |
End bp | 2105632 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010371 |
Product | Phage major tail protein, TP901-1 |
Protein accession | YP_617039 |
Protein GI | 103487478 |
COG category | [S] Function unknown |
COG ID | [COG5437] Predicted secreted protein |
TIGRFAM ID | [TIGR02126] phage major tail protein, TP901-1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0543379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00425281 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCATCG AAAATGGGAG CGCTTTTCTG CTCAAGGTCG GCGACGGCGG CGCGCCGCCG ACCTATCGGA CCGTCGCTGG GCTGCGCACG ACGCAACTGT CGGTGAACGG CGAGGCGGTG AACGTCACCA CCAAGGATTC GGGCGGATGG CGCGAGTTGC TGTCGGGCGC GGGGGTACGG TCGGTGTCGG TGAGCGCCGC GGGCATCTTT ACCGGGTCCG ATGCCGAGCT GCGGCTGCGC GGCCATGCGC TGTCGGGCGT GATCGACGAT TATGAGCTGA GCTTCGAGAG CGGCGAGCGG CTGCGCGGGC GCTTTCTGGT CACGCGGCTC GACTATGCCG GCGATTATAA TGGCGAGCGC AATTACACGC TGAACCTCGA ATCGAGCGGC GCGGTGGTGA GCCTGTGA
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Protein sequence | MAIENGSAFL LKVGDGGAPP TYRTVAGLRT TQLSVNGEAV NVTTKDSGGW RELLSGAGVR SVSVSAAGIF TGSDAELRLR GHALSGVIDD YELSFESGER LRGRFLVTRL DYAGDYNGER NYTLNLESSG AVVSL
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