Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1976 |
Symbol | |
ID | 4081020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2083542 |
End bp | 2084531 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638010352 |
Product | mandelate racemase/muconate lactonizing enzyme |
Protein accession | YP_617020 |
Protein GI | 103487459 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.49704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCC AACTGAAAAG CGCGCGCGTC GAACGCTGGC CCGTCGCGGG CTCGTTCGTC ATCAGTCGCG GCGCCAGGAA TCATGTCGAT GTCGTTGTCG CGGAGATCGA GGACAGCGGC GCGATCGGGC GCGGCGAGGG GACGCCGGTT TATTATCTGG GCGAGGATGC GGCCACGTGC CGCGACCAGA TCCTGCTCGC CGCGGCGCAC GTCGCCGACA TGGCCGCGGC CGAGGCGCGC GCGGCGGTGC AGGAGATCAT GGCGCCGGGA GCGGCGCGCA ATGCGCTCGA TTGCGCGCTC TGGGATCTGG AGGCGCGACA GCGTGGCCTG AGGCTCTGGC AGCTTGCGGG CTGCGACGGC GCGCCGACCG CACGGACGAC CGCCTTCACC ATCTCGCTCG GCAGTCCGGG CGCGATGGCC GAACAGGCGG CGACGGCGGC GGCCGACGGC TATCATCTGC TCAAGATCAA GCTGACGGGC GAAGGCGACC GGCTGCGCGT CGCCGGCGTG CGCAAGGGCG CTCCCCACGC CCGGCTGATC GTCGACGCCA ATGAAAGCTG GGCGCAGGTC GACATATTGG AAGAGGCCGA GGCACTGGCC GACATGGGCG TTGAAATGAT CGAACAGCCG GTGCCGGTCG GCGCCGACGC GCTGCTCGAT CCCGTTTATG CGTCGATTCC CTTCGTCGCC GACGAAAGCT GCCAGACGGC GGCCGACGTT GCGCGCATCG GCGCCTTTTA CGACGGGGTG AACATCAAGC TCGACAAGGC GGGCGGGCTG ACCGAGGCGC TGCGCATCGC CGACGCGGCC GACGCTGCGG GGCTGGCGAT CATGGTCGGC TGCATGCTCT CGACCAGCCT TGCGATCGCG CCCGCTTTCG TGCTCGCCCA GCGCGCGCGC TGGGTCGATT TGGACGGCCC GGCTTTGCTC GAACGCGACC GCGAGGGCGG GTTCGAATTT CGCGAAGGCC GCATCGGCAC GCCGCGCTAG
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Protein sequence | MAIQLKSARV ERWPVAGSFV ISRGARNHVD VVVAEIEDSG AIGRGEGTPV YYLGEDAATC RDQILLAAAH VADMAAAEAR AAVQEIMAPG AARNALDCAL WDLEARQRGL RLWQLAGCDG APTARTTAFT ISLGSPGAMA EQAATAAADG YHLLKIKLTG EGDRLRVAGV RKGAPHARLI VDANESWAQV DILEEAEALA DMGVEMIEQP VPVGADALLD PVYASIPFVA DESCQTAADV ARIGAFYDGV NIKLDKAGGL TEALRIADAA DAAGLAIMVG CMLSTSLAIA PAFVLAQRAR WVDLDGPALL ERDREGGFEF REGRIGTPR
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