| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1947 |
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| Symbol | |
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| ID | 4082896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2052468 |
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| End bp | 2053847 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010324 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_616992 |
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| Protein GI | 103487431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.673176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGTT TTAACGACTT TGGCTTGCAC GCCGACATCA ATCGAGCGCT TGCCGCCAAG
GATTATACCC AGCCGACCCC GATCCAGACA CAGGCGATCC CGCCGCTGAT GAAGGGCCGC
GACCTGTGCG GCATCGCGCA GACCGGGACC GGCAAGACCG CCGGCTTCTC GCTCCCCTCG
ATCCATCACC TTTTGACCTA TCCGCACCGC CCGACCCCGC GCGGCTGCCG GATGCTCGTC
CTCGCGCCGA CGCGCGAGCT TGCCGCGCAG ATCGCGCAGA GCTGCCGCGA TTACGGCCGC
TTTACCAAGC TCAGCGTCTC GACCGTCTTC GGCGGCGTGC CGATCAACAA GCAGATCCGC
GACCTTTCGC AGGGCGTCGA TATCCTCGTC GCGACGCCGG GCCGCCTGCT CGACCTGATC
GACCAGCGCG CGCTGCGTCT CGACGATGTT GAAATCTTCG TGCTCGACGA AGCCGATCAG
ATGATGGACA TGGGTTTCAT CCATTCGCTG CGCCGCGTTG CAAAGCTGTT GCCCTCGCGG
CGCCAGAACC TGTTCTTCTC GGCGACCATG CCGAAGGAGA TTGCGGGCCT TGCCGACCAG
TTCCTCAACG ATCCGGTTAC CGTGTCGGTC GCGCCGCAGG CGACGACCGC CGAAAAGGTC
CGCCAGTTCG CCACTTTCGT CGAACAGAAG GAAAAGCAGG CGCTGCTCCA TCACGTCATC
AAGACGTCGG ACATCGATCG CGCGCTGATC TTCACGCGCA CCAAACATGG CGCCGACCGC
GTCGTGCGTC ACCTGAAGGG TGCGGGCATC GAGGCGTTCG CCATCCACGG CAACAAGAGC
CAGGCGCAGC GCACCGCCGC GCTGCAGGCC TTTCGTTCGG GCCAGGTGCG CCTGCTTGTC
GCAACCGACA TCGCCGCGCG CGGCATCGAC GTGTCGGGGG TCAGCCATGT CATCAATTTC
GAGATCCCGA ACGTCCCCGA ACAATATGTT CACCGCATCG GTCGCACGGC GCGCGCCGGG
GCAGAGGGCA TCGCGATCAG CTTCATCGCC CCCGACGAGC GGCCGTACAT ACGCGACATC
GAGCGCGTGA CGCGGACCAG GGCCGAGCCG ATGCCGCTTC CCGAAGGCTT CAACGAACTG
GTGCGCAACC TTCCCAAGCC GGTGCAGCCG CCGCGCGATA CCGGCAGCAG GGGCCGCGAT
CCGAACCGCC AGCGTCAGGA TGCGCGTCGC CAGCCGAGCG GCGGCCAACC TCGCGGTGAT
CGCGGTCCGC GCCGCGATGC TCCGGCCGGC GAAGGCGCCG AAGGCCAGCG CAAGCGCCGC
TTCCGCCCGC GCAACAAAAG CGTCGGCGCG CACAAAGGCG CGGTGAAGCG CGTCGGTTGA
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| Protein sequence | MTSFNDFGLH ADINRALAAK DYTQPTPIQT QAIPPLMKGR DLCGIAQTGT GKTAGFSLPS
IHHLLTYPHR PTPRGCRMLV LAPTRELAAQ IAQSCRDYGR FTKLSVSTVF GGVPINKQIR
DLSQGVDILV ATPGRLLDLI DQRALRLDDV EIFVLDEADQ MMDMGFIHSL RRVAKLLPSR
RQNLFFSATM PKEIAGLADQ FLNDPVTVSV APQATTAEKV RQFATFVEQK EKQALLHHVI
KTSDIDRALI FTRTKHGADR VVRHLKGAGI EAFAIHGNKS QAQRTAALQA FRSGQVRLLV
ATDIAARGID VSGVSHVINF EIPNVPEQYV HRIGRTARAG AEGIAISFIA PDERPYIRDI
ERVTRTRAEP MPLPEGFNEL VRNLPKPVQP PRDTGSRGRD PNRQRQDARR QPSGGQPRGD
RGPRRDAPAG EGAEGQRKRR FRPRNKSVGA HKGAVKRVG
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