Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1935 |
Symbol | |
ID | 4082884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2040111 |
End bp | 2042204 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010312 |
Product | malate synthase G |
Protein accession | YP_616980 |
Protein GI | 103487419 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAT TTCTCGACCG CTCGGGCCTG TCCGTCGATT CGCGGCTGGC CGATTTCATC GAGCAGCGCG CGCTGCCCGG CACGGGGCTG GACGCCGCGC GCTTCTGGGC CGATTTCGCT GCTCTGCTGG GCCAGTTTGC GCCGGAAAAT ACGGAGCTGC TGGCGAAGCG CGAGGCGTTG CAGTCGCAGA TCGACGCCTG GCATCGGGCC CGCGAAGGCC AGCCGCACGA TCCCGCCGCT TATCAGCGCT TCCTGTCCGA GATCGGCTAT CTCGTCCCCG AACCCGAGCC GTTTGCGATC GGCACGGCGA ATGTCGATCC GGAAATCGCA ACAATGGCCG GGCCGCAGCT CGTCGTGCCC GCCCTCAACG CACGCTTTGC CCTGAACGCC GCCAACGCGC GCTGGGGCAG CCTCTATGAC GCGCTTTACG GTACCGACGC ACTCGACGCG CCGCCTGCGA AGCCCGGCGG CTATGATGCG GAACGCGGCG CGGCGGTGAT CGCGCGCGCC AAGGCCTTTC TGGACGACGC GGTGCCGCTG GCGTCGGGTC GCTGGGCCGA CTGGCAGGGC GGACAGCTTT TGCTTGCCGA TCCGTCGCAA TGGGTCGGCA GCAGAACCGG CGGTATTCTG CTCCGCCACA ATGGCCTGCA CATCGAGCTG GTGATCGACC CCGACGGCGC GATCGGCAAG ACCGACCCGG CGGGGATTTC CGATGTCATC CTCGAAGCCG CGCTGACCAC CATCATCGAC CTTGAGGACA GCGTCGCGGC GGTCGATGGC GAGGACAAGA CGCTCGGCTA TGCGAACTGG CTGGGGCTGA TGCGCGGCGA CCTCACCGAA AGTTTCGAAA AGGGCGGCAA GATCGTCACG CGCGCCATGG CGACCGACCG CGAATGGACG TCGCCCGACG GCGAGCCGTT CACGCTCCAC GGCCGCAGTG TGATGTTCGT GCGAAATGTC GGCCATCTGA TGACGACGCC GATGATCCGG CTGCCCGGTG GCGCCGAAGC GCCCGAAGGG CTGTGCGATG CGGTCATCAC CAGCCTGTGC TCGCTCCACG ATCTGAAGGG CCTCGGCGCC CTCAGGAACA GTCGCGCGGG CAGCATCTAT ATCGTCAAGC CCAAGCAGCA CGGGCCCGAG GAATGCGGCT TCACGAACCG GCTGTTCGAC GCGGTCGAGG ACATGCTGGG GCTGGCGCGC CACACGATCA AGGTCGGGGT GATGGACGAG GAACGTCGCA CCAGCGCGAA CCTTGCCGCC TGCATCCGCG CGGTGAAGGA CCGCATCGTC TTTATCAACA CCGGCTTTCT CGACCGCACC GGCGACGAGA TTCACACGTC GATGCGCGCG GGACCGATGA TTCCGAAGGG CGAGATGAAG GCGTCGGACT GGATCGCCGC CTATGAGGAT CGCAACGTCC GCATCGGGCT CGCCTGCGGC CTGTCGGGCA AGGCGCAGAT CGGCAAGGGC ATGTGGGCGA TGCCCGACAT GATGCGGGCG ATGCTCGAGG CGAAAATCGG CCACCCCAGA TCGGGCGCGA ACACCGCCTG GGTTCCCTCG CCGACCGCGG CGACGCTGCA TGCGCTGCAT TATCATATGG TCGATGTGTT TGCGCGGCAG AAGGAGATCG CGCGCGAGGC GGTGCCGTCG CTGGACCGCC TGCTCACCAT TCCCGTCGCC GTGGGGCGCA ATTGGAGCGA CGCCGAAATC GCGCGCGAAC TCGACAATAA TTGCCAGGGC ATATTGGGCT ATGTCGTACG CTGGATCGAC CAGGGCGTCG GCTGTTCCAA GGTGCCCGAC ATCGACGACG TCGGCCTGAT GGAGGATCGC GCGACGCTGC GGATCAGCAG CCAGGCGCTC GCCAACTGGC TCCTCCACGG CGTCTGCACG CCCGAACAGG TCGACGCCGC GCTGGCGCGG ATGGCGGCGA AGGTCGATGC CCAGAATGCG GGCGACCCGC TGTACGAAAA GCTGACGCCC GATAGCGTCG CGTATCGGGC AGCGCGCGCG CTGATCTTCG AAGGCGTGGC GCAGCCGTCG GGCTACACCG AACCGCTGCT GCACAAATAT CGGCAGATGA AGAAGGCGGG GTGA
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Protein sequence | MTEFLDRSGL SVDSRLADFI EQRALPGTGL DAARFWADFA ALLGQFAPEN TELLAKREAL QSQIDAWHRA REGQPHDPAA YQRFLSEIGY LVPEPEPFAI GTANVDPEIA TMAGPQLVVP ALNARFALNA ANARWGSLYD ALYGTDALDA PPAKPGGYDA ERGAAVIARA KAFLDDAVPL ASGRWADWQG GQLLLADPSQ WVGSRTGGIL LRHNGLHIEL VIDPDGAIGK TDPAGISDVI LEAALTTIID LEDSVAAVDG EDKTLGYANW LGLMRGDLTE SFEKGGKIVT RAMATDREWT SPDGEPFTLH GRSVMFVRNV GHLMTTPMIR LPGGAEAPEG LCDAVITSLC SLHDLKGLGA LRNSRAGSIY IVKPKQHGPE ECGFTNRLFD AVEDMLGLAR HTIKVGVMDE ERRTSANLAA CIRAVKDRIV FINTGFLDRT GDEIHTSMRA GPMIPKGEMK ASDWIAAYED RNVRIGLACG LSGKAQIGKG MWAMPDMMRA MLEAKIGHPR SGANTAWVPS PTAATLHALH YHMVDVFARQ KEIAREAVPS LDRLLTIPVA VGRNWSDAEI ARELDNNCQG ILGYVVRWID QGVGCSKVPD IDDVGLMEDR ATLRISSQAL ANWLLHGVCT PEQVDAALAR MAAKVDAQNA GDPLYEKLTP DSVAYRAARA LIFEGVAQPS GYTEPLLHKY RQMKKAG
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