Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1919 |
Symbol | |
ID | 4082776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2021312 |
End bp | 2023207 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010296 |
Product | asparagine synthase, glutamine-hydrolyzing |
Protein accession | YP_616964 |
Protein GI | 103487403 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) [TIGR03108] exosortase 1 system-associated amidotransferase 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGCA TCGCGGGCAT CTATCATCTT GAGACCGCGA AACCGGTCGA TCCGGCGCGG CTGCGCGCGA TGCTCCAGCC GATGCAGCAT CGCGGCCCCG ACGGGTCGGG CGAATGGACC GCGCCCGGCG TCGGGCTGGC GCACCTGCGC CTCTCGATCA TCGACATTGC GGGCAGCCCG CAGCCGATGG CGAGCGACGA TGAGGCGGTG ACGCTCACCT ACAACGGCGA AATCTATAAC TTCCGCGAAC TGCGCGCCGA ACTCGAGGAT CGCGGGCACC GTTTCCGCAC CAGCGGCGAT ACCGAGGTCA TCATCGCGGC GTGGCGGCAA TGGGGGCCCG AATGCCTGTC GCGGCTCAAC GGCATGTTCG CCTTTGCGAT CCACGACCAT GCGCGCGGCT GCCTGTTCCT CGCGCGCGAC CGGCTGGGGG TGAAGCCGCT GCACTATGCG CGGCTGGCGG ACGGATCGGT GGCGTTCGCG TCGGAACTGA AAGGGTTGCT GCGCCATCCC CTGCTGCGGC AGGAAGCCAG TTTCTCCGCG GTCGAGGATT TCTTCGCGCT CGGCTATGTC CCCGACGACA ATTGCATCGT TGCGGGGATC GAGAAGCTGC CCGCCGGGCA TTATCTGATG CTCGAACGCG GCAAGGGCGT GCCCGCGCCG ACCTGCTGGT GGGCGCCCGA TTTTTCGCGG CGGATCAAGG CGAGCGAGGG CGAGGCGGCC GAACATCTGG TTTATCTGAT GCGCGCCGCC GTGACCGACC GCATGGTCGC CGACGTGCCC TTGGGCGCCT TTCTGTCGGG CGGGGTCGAT TCGAGCGCGG TCGTCGCGCT GATGGCCGAG GCGAGCGCGA AGGCGGTCAA GACCTGCACG ATCGGGTTCG ACCAAGCGGC GCTCGACGAG ACGGCCTATG CGCAGCAAAT CGCCGAGCGC TTCGCGACCG ATCACCGCAC GCGCACGGTG GCGGCGGGCG ATTTCGCGCT GATCGACCGG ATCGCCGACA TGTTCGACGA ACCCTTTGCC GACGCGAGCG CGCTGCCGAC GTACCGGGTG TGCGAGCTGG CGCGCGAGGA GGTGACGGTG GCTTTGTCGG GCGACGGCGC CGACGAGGCG TTTGCGGGCT ATCGGCGGCT GGTGTTCCAG CATCAGGAAG AAAAGCTGCG CGGGCTGATC CCCGGTTTCC TGCGCCGCGG TGTGCTGGGC CCGCTATCGC ATGTCTGGCC GCAGATGGAC TGGGCGCCGC GTCCGCTCCG CGCGCGTGCA ACGCTCGCCA GCCTGTCGAA GAGCGGCGCG GAGGGTTATG CCGAGGCGGT CGGGGTGACG GGACCGGTGC AGCGCGCGCG GCTGTTCAAC GATGCAGCGA TCCGCGGGCT GGGCGATCAT GTCGCCGAGG GGCGATACTG GAAGGCGATG GCGGAGGCGC CCGCGCGCGA ACCGCTCGAC CGCGCGCAAT ATGCCGACCT CAAAATCTGG CTGCCCGGCG ACATTTTGAC CAAGACCGAC CGGATGAGCA TGGCGGTCAG CCTGGAGGCG CGCGAGCCTT TGCTCGATTA CCGGCTCGTC GAGTTCGCCG CGAGCCTGCC CGCGTCGATG CGGGTCAAGG GCGGCACGGG CAAGGCGCTA TTGAAGCAGG CGATGGAACG CTATCTGCCG CACGACATCC TCTATCGGCC CAAGATGGGG TTCGTGACGC CAGTGTCGGC CTGGTTCCGC GGCGCGCTCG CCCAGCAGGC GAAGGCGCTG GCAACCTCGT CTACGCTTGC CCGGAGCGGC TGGTTCGACA TGGCCGAGAT CGAGCGGATC GTCGCCGCGC ACCAGTCGGG CCGCCGCGAC CATGGGCGGT TGATCTGGCA ATTTTTCATG CTGGAAAAGT CGCTGGCGAA GCTGTTCGGG ATCTGA
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Protein sequence | MCGIAGIYHL ETAKPVDPAR LRAMLQPMQH RGPDGSGEWT APGVGLAHLR LSIIDIAGSP QPMASDDEAV TLTYNGEIYN FRELRAELED RGHRFRTSGD TEVIIAAWRQ WGPECLSRLN GMFAFAIHDH ARGCLFLARD RLGVKPLHYA RLADGSVAFA SELKGLLRHP LLRQEASFSA VEDFFALGYV PDDNCIVAGI EKLPAGHYLM LERGKGVPAP TCWWAPDFSR RIKASEGEAA EHLVYLMRAA VTDRMVADVP LGAFLSGGVD SSAVVALMAE ASAKAVKTCT IGFDQAALDE TAYAQQIAER FATDHRTRTV AAGDFALIDR IADMFDEPFA DASALPTYRV CELAREEVTV ALSGDGADEA FAGYRRLVFQ HQEEKLRGLI PGFLRRGVLG PLSHVWPQMD WAPRPLRARA TLASLSKSGA EGYAEAVGVT GPVQRARLFN DAAIRGLGDH VAEGRYWKAM AEAPAREPLD RAQYADLKIW LPGDILTKTD RMSMAVSLEA REPLLDYRLV EFAASLPASM RVKGGTGKAL LKQAMERYLP HDILYRPKMG FVTPVSAWFR GALAQQAKAL ATSSTLARSG WFDMAEIERI VAAHQSGRRD HGRLIWQFFM LEKSLAKLFG I
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